Structure of PDB 4gx2 Chain C Binding Site BS04
Receptor Information
>4gx2 Chain C (length=547) Species:
243231
(Geobacter sulfurreducens PCA) [
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QNLKVLLLYCAFLLVMLLAYASIFRYLMWHLEGRAYSFMAGIYWTITVMT
TLGFGDITFESDAGYLFASIVTVSGVIFLDIILPFGFVSMFLAPWIERRL
RYHPTIELPDDTRGHILIFGIDPITRTLIRKLESRNHLFVVVTDNYDQAL
HLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIANLSDPDNANLCLTVRS
LCQTPIIAVVKEPVHGELLRLAGANQVVPLTRILGRYLGIRATTCGALAH
ILDSFGNLQIAELPVHGTPFAGKTIGESGIRQRTGLSIIGVWERGSLTTP
QRETVLTEQSLLVLAGTKSQLAALEYLIGEAPEDELIFIIGHGRIGCAAA
AFLDRKPVPFILIDRQESPVCNDHVVVYGDATVGQTLRQAGIDRASGIIV
TTNDDSTNIFLTLACRHLHSHIRIVARANGEENVDQLYAAGADFVVSNAS
VGANILGNLLEHKESAFLSEGMAVFRRPLPPAMAGKTIAETRLRPLTGCS
IVAIEAPDRADILISPPPETILAEGARLILIGTSEQEKTFDQTIAAR
Ligand information
Ligand ID
NAD
InChI
InChI=1S/C21H27N7O14P2/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(32)14(30)11(41-21)6-39-44(36,37)42-43(34,35)38-5-10-13(29)15(31)20(40-10)27-3-1-2-9(4-27)18(23)33/h1-4,7-8,10-11,13-16,20-21,29-32H,5-6H2,(H5-,22,23,24,25,33,34,35,36,37)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1
InChIKey
BAWFJGJZGIEFAR-NNYOXOHSSA-N
SMILES
Software
SMILES
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[C@@H]2O[C@H](CO[P]([O-])(=O)O[P@](O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)C2C(C(C(O2)COP(=O)([O-])OP(=O)(O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)O)O)O)O)C(=O)N
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[CH]2O[CH](CO[P]([O-])(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)([O-])O[P@@](=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)O)O)O)O)C(=O)N
Formula
C21 H27 N7 O14 P2
Name
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
ChEMBL
CHEMBL1234613
DrugBank
DB14128
ZINC
PDB chain
4gx2 Chain C Residue 610 [
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Receptor-Ligand Complex Structure
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PDB
4gx2
Distinct gating mechanisms revealed by the structures of a multi-ligand gated K(+) channel.
Resolution
3.2 Å
Binding residue
(original residue number in PDB)
V227 K228 P246 L247 T248 G360 R361 D381 R382 Q383 D397 A398 T419 N420 R444
Binding residue
(residue number reindexed from 1)
V210 K211 P229 L230 T231 G343 R344 D364 R365 Q366 D380 A381 T402 N403 R427
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000166
nucleotide binding
GO:0003674
molecular_function
GO:0008324
monoatomic cation transmembrane transporter activity
GO:0046872
metal ion binding
Biological Process
GO:0006813
potassium ion transport
GO:0008150
biological_process
GO:0098655
monoatomic cation transmembrane transport
Cellular Component
GO:0016020
membrane
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:4gx2
,
PDBe:4gx2
,
PDBj:4gx2
PDBsum
4gx2
PubMed
23240087
UniProt
Q74FS9
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