Structure of PDB 4gx1 Chain C Binding Site BS04
Receptor Information
>4gx1 Chain C (length=546) Species:
243231
(Geobacter sulfurreducens PCA) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
NLKVLLLYCAFLLVMLLAYASIFRYLMWHLEGRAYSFMAGIYWTITVMTT
LGFGDITFESDAGYLFASIVTVSGVIFLDIILPFGFVSMFLAPWIERRLR
YHPTIELPDDTRGHILIFGIDPITRTLIRKLESRNHLFVVVTDNYDQALH
LEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIANLSDPDNANLCLTVRSL
CQTPIIAVVKEPVHGELLRLAGANQVVPLTRILGRYLGIRATTCGALAHI
LDSFGNLQIAELPVHGTPFAGKTIGESGIRQRTGLSIIGVWERGSLTTPQ
RETVLTEQSLLVLAGTKSQLAALEYLIGEAPEDELIFIIGHGRIGCAAAA
FLDRKPVPFILIDRQESPVCNDHVVVYGDATVGQTLRQAGIDRASGIIVT
TNDDSTNIFLTLACRHLHSHIRIVARANGEENVDQLYAAGADFVVSNASV
GANILGNLLEHKESAFLSEGMAVFRRPLPPAMAGKTIAETRLRPLTGCSI
VAIEAPDRADILISPPPETILAEGARLILIGTSEQEKTFDQTIAAR
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
4gx1 Chain C Residue 607 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4gx1
Distinct gating mechanisms revealed by the structures of a multi-ligand gated K(+) channel.
Resolution
2.8 Å
Binding residue
(original residue number in PDB)
G360 R361 D381 R382 G396 D397 A398 T419 N420 R444
Binding residue
(residue number reindexed from 1)
G342 R343 D363 R364 G378 D379 A380 T401 N402 R426
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000166
nucleotide binding
GO:0003674
molecular_function
GO:0008324
monoatomic cation transmembrane transporter activity
GO:0046872
metal ion binding
Biological Process
GO:0006813
potassium ion transport
GO:0008150
biological_process
GO:0098655
monoatomic cation transmembrane transport
Cellular Component
GO:0016020
membrane
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:4gx1
,
PDBe:4gx1
,
PDBj:4gx1
PDBsum
4gx1
PubMed
23240087
UniProt
Q74FS9
[
Back to BioLiP
]