Structure of PDB 1by4 Chain C Binding Site BS04
Receptor Information
>1by4 Chain C (length=78) Species:
9606
(Homo sapiens) [
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KHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDK
RQRNRCQYCRYQKCLAMGMKREAVQEER
Ligand information
Ligand ID
ZN
InChI
InChI=1S/Zn/q+2
InChIKey
PTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
Formula
Zn
Name
ZINC ION
ChEMBL
CHEMBL1236970
DrugBank
DB14532
ZINC
PDB chain
1by4 Chain C Residue 2331 [
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Receptor-Ligand Complex Structure
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PDB
1by4
Structural basis of RXR-DNA interactions.
Resolution
2.1 Å
Binding residue
(original residue number in PDB)
C2171 C2177 C2187 C2190
Binding residue
(residue number reindexed from 1)
C40 C46 C56 C59
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003700
DNA-binding transcription factor activity
GO:0008270
zinc ion binding
GO:0043565
sequence-specific DNA binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
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Molecular Function
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Biological Process
External links
PDB
RCSB:1by4
,
PDBe:1by4
,
PDBj:1by4
PDBsum
1by4
PubMed
10669605
UniProt
P19793
|RXRA_HUMAN Retinoic acid receptor RXR-alpha (Gene Name=RXRA)
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