Structure of PDB 8yib Chain B Binding Site BS04
Receptor Information
>8yib Chain B (length=382) Species:
1280
(Staphylococcus aureus) [
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QPLNKYPVVFVHGFLGLVGDNAPALYPNYWGGNKFKVIEELRKQGYNVHQ
ASVSAFGSNYDRAVQLYYYIKGGRVDYGAAHAAKYGHERYGKTYKGIMPN
WEPGKKVHLVGHSMGGQTIRLMEEFLRNGNKEEIAYHQAHGGEISPLFTG
GHNNMVASITTLATPHNGSQAADKFGNTEAVRKIMFALNRFMGNKYSNID
LGLTQWGFKQLPNESYIDYIKRVSKSKIWTSDDNAAYDLTLDGSAKLNNM
TSMNPNITYTTYTGVSSHTGPLGYENPDLGTFFLMDTTSRIIGHDAREEW
RKNDGVVPVISSLHPSNQPFVNVTNNEPATRRGIWQVKPILQGWDHVDFI
GVDFLDFKRKGSELANFYIGIINDLLSVEATE
Ligand information
Ligand ID
CA
InChI
InChI=1S/Ca/q+2
InChIKey
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
Formula
Ca
Name
CALCIUM ION
ChEMBL
DrugBank
DB14577
ZINC
PDB chain
8yib Chain B Residue 410 [
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Receptor-Ligand Complex Structure
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PDB
8yib
Crystal structure of Staphylococcus aureus lipase complex with unsaturated petroselinic acid.
Resolution
2.27 Å
Binding residue
(original residue number in PDB)
G283 D348 D351 D356 D359
Binding residue
(residue number reindexed from 1)
G280 D345 D348 D353 D356
Annotation score
1
Enzymatic activity
Enzyme Commision number
3.1.1.3
: triacylglycerol lipase.
External links
PDB
RCSB:8yib
,
PDBe:8yib
,
PDBj:8yib
PDBsum
8yib
PubMed
38757397
UniProt
A0A0U1MWF9
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