Structure of PDB 8gj3 Chain B Binding Site BS04
Receptor Information
>8gj3 Chain B (length=364) Species:
83333
(Escherichia coli K-12) [
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SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGK
TSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKV
EDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVK
FLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPR
ALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALS
LVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA
LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEM
TLLRALAFHPRMPL
Ligand information
Ligand ID
ALF
InChI
InChI=1S/Al.4FH/h;4*1H/q+3;;;;/p-4
InChIKey
UYOMQIYKOOHAMK-UHFFFAOYSA-J
SMILES
Software
SMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0
F[Al-](F)(F)F
Formula
Al F4
Name
TETRAFLUOROALUMINATE ION
ChEMBL
DrugBank
DB04444
ZINC
PDB chain
8gj3 Chain B Residue 703 [
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Receptor-Ligand Complex Structure
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PDB
8gj3
Structural characterisation of the complete cycle of sliding clamp loading in E. coli
Resolution
2.8 Å
Binding residue
(original residue number in PDB)
K51 R215
Binding residue
(residue number reindexed from 1)
K50 R214
Annotation score
1
Enzymatic activity
Enzyme Commision number
2.7.7.7
: DNA-directed DNA polymerase.
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003887
DNA-directed DNA polymerase activity
GO:0005515
protein binding
GO:0005524
ATP binding
GO:0016887
ATP hydrolysis activity
GO:0042802
identical protein binding
GO:0046872
metal ion binding
Biological Process
GO:0006260
DNA replication
GO:0006261
DNA-templated DNA replication
GO:0071897
DNA biosynthetic process
GO:0075523
viral translational frameshifting
Cellular Component
GO:0009360
DNA polymerase III complex
GO:0030894
replisome
GO:0043846
DNA polymerase III, clamp loader complex
View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:8gj3
,
PDBe:8gj3
,
PDBj:8gj3
PDBsum
8gj3
PubMed
UniProt
P06710
|DPO3X_ECOLI DNA polymerase III subunit tau (Gene Name=dnaX)
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