Structure of PDB 7y7p Chain B Binding Site BS04

Receptor Information
>7y7p Chain B (length=908) Species: 5141 (Neurospora crassa) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VAARLRNIWPKFPKWLHEAPLAVAWEVTRLFMHCKVDLELKYDPSWSTAR
DVTDIWKTLYRLEKPPNDVFVTAMTGNFESKGSAVVLSAVLDYNPDNSPA
PLYLVKLKPLMFEQGCRLTRRFGPDRFFEILIPSPTSTSPSVPPVVSKQP
AVEEVIQWLTMGQHSLVGRQWRAFFAKDAGYRKPLRPIIKERVHFFAETG
ITFRPDEPVEQRTEFKVSQMLDWLLQLDNNTWQPHLKLFSRIQLGLSKTY
AIMTLEPHQIRHHKTDLLSPSGTGEVMNDGVGRMSRSVAKRIRDVLGLGD
VPSAVQGRFGSAKGMWVIDVDDTGDEDWIETYPSQRKWECDFVDKHQRTL
EVRSVASELKSAGLNLQLLPVLEDRARDKVKMRQAIGDRLINDLQRQFSE
QKHALNRPVEFRQWVYESYSSRATRVSHGRVPFLAGLPDSQEETLNFLMN
SGFDPKKQKYLQDIAWDLQKRKCDTLKSKLNIRVGRSAYIYMIADFWGVL
EENEVHVGFSSKFRDEEESFTLLSDCDVLVARSPAHFPSDIQRVRAVFKP
ELHSLKDVIIFSTKGDVPLAKKLSGGDYDGDMAWVCWDPEIVDGFVNAEM
PLEPDLSRYLKKDKTTFKQLMASHGTGSAAKEQTTYDMIQKSFHFALQPN
FLGMCTNYKERLCYINNSVSNKPAIILSSLVGNLVDQSKQGIVFNEASWA
QLRRELLGGALSLPDPMYKSDSWLGRGEPTHIIDYLKFSIARPAIDKELE
AFHNAEDGAHFWDPDLASYYTFFKEISDKSRSSALLFTTLKNRIGEVEKE
YGRPVRVNQVYEKWCAITPESKVIRLLELSFLADREMNTWALLRASTAFK
LYYHKSPKFVWQMAGRQLAYIKAQMTSRPGEGAPALMTAFMYAGLMPDKK
FTKQYVAR
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain7y7p Chain B Residue 1505 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7y7p Structural insights into the dual activities of the two-barrel RNA polymerase QDE-1.
Resolution2.7 Å
Binding residue
(original residue number in PDB)		D1007 D1009
Binding residue
(residue number reindexed from 1)		D577 D579
Annotation score1
Enzymatic activity
Enzyme Commision number 2.7.7.48: RNA-directed RNA polymerase.
Gene Ontology
Molecular Function
GO:0003968 RNA-dependent RNA polymerase activity

View graph for
Molecular Function
External links
PDB RCSB:7y7p, PDBe:7y7p, PDBj:7y7p
PDBsum7y7p
PubMed36039765
UniProtQ9Y7G6

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