Structure of PDB 7nsn Chain B Binding Site BS04

Receptor Information
>7nsn Chain B (length=1224) Species: 220687 (Neobacillus novalis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SKTDFFSSFEKSDLQLTWTNTVETDANGKKMSSGIDGNVAPPPGDMKSLI
GKGPTSSYTAKTNVGWTGLGALNYSGTHLSDGRAYSYNKLYDVDILVTPA
TELSYFIAPEFTDKNHNDYSSTYVSVDLAFSDGTYLHDLKAVDQYGVGLN
PKDQGDSKYLYVNQWNTIKSTIGSVAAGKTIKRILVAYDNPKGPGAFRGS
IDDIKIDGKPVQKAFGSPIDYVNILRGTQSNGSFSRGNNFPAVAIPHGFN
FWTPTTNAGSSWIYQYHESNSVNNLPQIQAFSVSHEPSPWMGDRQTFQVM
PSASTAATPNANRDSRALEFNHANEIAQPHYYSVKFENGIRTEMTPTDHA
AMFKFTFTGATSNLIFDNVNNNGGLTIDAKSGEITGYSDVKSGLSTGATR
LFVYAAFDKPVIKSGKLTGESRNNVTGYVRFDTSKDEDKVVTMKIATSLI
SVEQAKKNLEQEIGLNDTFEGLKEKAKTEWNKKLGIIEVEGASEDQLVTL
YSNLYRLFLYPNSAFENVGTTTDPVYKYASPYSAATGQDTATTTGAKIVD
GKTYVNNGFWDTYRTAWPAYSLLTPTFAGELIDGFVQQYRDGGWIARWSS
PGFANLMPGTSSDVAFADAYLKGVTNFDVQSFYQSAIRNAEAVSPNAGTG
RKGLTTSIFDGYTNTSTGEGLAWAMDGYINDFGIANLAKALKEKGDKSDP
YYANYAADYQYFLNRAQNYVHMFNPSIEFFNGRTANGAWRSTPDNFNPAV
WGSDYTETNGWNMAFHVPQDGQGLANLYGGKEGLATKLDQFFSTSETGLF
PGSYGGTIHEMREARDVRMGMYGHSNQPSHHIAYMYDYAGQPWKTQEKVR
EALNRLYIGSAIGQGYSGDEDNGEMSAWYILSAMGFYPLKMGTPEYAIGA
PLFKKATIHLENGKSIVINAPNNSKENKYVQSMKVNGKAYAKTSILHADI
ANGAVIDFEMGSKPSKWGSGDQDILQSITPGSTDGTSLSPLPLRDVTDRL
IAAEKGAVTVSDEGNGQLLFDNTSNTQLSMKSKTPSIVYQFKEGKQNVKM
YTLTSSKASQNEDPKSWVLKGSNDGKSWSVLDQRKNETFQWRQYTRAFTI
QHPGKYSQYKLEITENAGAEVTTLAELELLGYDDVTNSYQAVYELMEQFK
QSKDLTGPMAVQLNNSLTTSLDHFKKDHKDQAIKHLEDFLKHLNNKGLQD
RISSKAKGVLSADANQLIVLLARD
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain7nsn Chain B Residue 1504 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7nsn Structural and functional characterization of multi-domain GH92 alpha-1,2-mannosidase from Neobacillus novalis
Resolution2.29 Å
Binding residue
(original residue number in PDB)		L1205 D1208 T1210 T1213 A1312 E1313
Binding residue
(residue number reindexed from 1)		L1018 D1021 T1023 T1026 A1125 E1126
Annotation score4
Enzymatic activity
Enzyme Commision number 3.2.1.-
Gene Ontology
Molecular Function
GO:0030246 carbohydrate binding
Biological Process
GO:0005975 carbohydrate metabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:7nsn, PDBe:7nsn, PDBj:7nsn
PDBsum7nsn
PubMed37071393
UniProtA0A7R9KAR8

[Back to BioLiP]