Structure of PDB 7bm6 Chain B Binding Site BS04

Receptor Information
>7bm6 Chain B (length=727) Species: 63186 (Zobellia galactanivorans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AQEHPSLILTKAGVEKIRAELGNIPIFDATLEKVKAEVDAEIALGIDTPL
PKDYSGGYTHERHKRNFFILQKAGVLYQILNDEKYALYIKDMLFQYEGMY
KDLPVHPQTRSYARGKLFWQCLNDSNWLVYVSQAYDCVYDYLSKKERKQL
EKNLFRPFADYISIENPQFYNRVHNHSTWGNAAVGMIGLVMGDEELIQRA
LYGIEDDGLPIGAKDNDGGFIKVEGQKAGFLANIDEPFSPDGYYTEGPYA
QRYAMYPFLIFAEALHNVRPQQKIFEHKDGVLLKSVNTLLSLSDADGEFF
PLNDAQKGMSYHSRELVTAVDIAYHYGNHNPQLLSIAEEQGQVLLDDSGL
AVALGIREGKSEDFQKKSIKLSDGANGDQGGVAILRYGNEAMTLVYKYAA
QGLSHGHYDKLSFSLYEKGTEILQDYGLARFVNIEQKGGGNYLKENTTWA
KQTIAHNTLVQNETSHFEGKYEVGSQHHSELYFFDASNPEVQVVSAKEQN
AYPGTEMHRTMALIKTDGFEKPFVLDILRVGSNAANQYDLPFYFKGQVMQ
TNFDFTTPKSLEPLGSDNGYQHLWSEGLGQPKGDNSQLSWLENGRFYTLT
TATNNDDELHFVRIGANDPEFNLRRDAGLIIRRKNTKNTTFVSILESHGH
YSPVSEFSVNANSSISKIELMLDTKEYTAVLIDAKSNTEQTLLILANENK
NVNKEHIIEIKGKEYRWTGPYQFIKIN
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain7bm6 Chain B Residue 802 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB7bm6 Structure-function analysis of a new PL17 oligoalginate lyase from the marine bacterium Zobellia galactanivorans DsijT.
Resolution2.16 Å
Binding residue
(original residue number in PDB)		H431 D449 H480
Binding residue
(residue number reindexed from 1)		H407 D425 H456
Annotation score4
Enzymatic activity
Enzyme Commision number 4.2.2.3: mannuronate-specific alginate lyase.
Gene Ontology
Cellular Component
GO:0042597 periplasmic space

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Molecular Function
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Cellular Component
External links
PDB RCSB:7bm6, PDBe:7bm6, PDBj:7bm6
PDBsum7bm6
PubMed34184062
UniProtG0LCA3

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