Structure of PDB 6a0k Chain B Binding Site BS04

Receptor Information
>6a0k Chain B (length=442) Species: 1665 (Arthrobacter globiformis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TAPDWLADAVFYQIFPERFANADPSLDPQNVVPWGSTPTPDNFFGGDLQG
IIDHLDHIVALGANALYLTPIFEADTNHRYDAKDYFSIDHRLGTLETFHA
LMAECRARGIRIVLDAVLNHCGDGHWAFADVVENEADSAYVNWFSVEGFP
VTAHPTPNYRTCSGCYYLPKWNAYNPEVRHHHLDVARYWIDQGIDGWRLD
VPYFINHTFWREFRTAVKGKSEDLYIVAEEWRSPVEWLQGDTADGTMNYT
ARDLILGFTADGGIDASALAAGLNALHAEIPAGFHRGMLNLLGSHDTERV
LTRHAGDVEAALLSYALLFSLEGAPMVYYGDEVGLTGDNDPGCRGAMPWN
EESWNTRLLDGIRTFAAFRAHQPAMRRGRQTAVALDADTIAIVRSGGDER
AAVIVHRGEGTTVDTASIPELAPLDADTVVLGPLGTASLATA
Ligand information
Ligand IDBGC
InChIInChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6-/m1/s1
InChIKeyWQZGKKKJIJFFOK-VFUOTHLCSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.6C(C1C(C(C(C(O1)O)O)O)O)O
CACTVS 3.370OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@@H]1O
CACTVS 3.370OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 1.7.6C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)O
ACDLabs 12.01OC1C(O)C(OC(O)C1O)CO
FormulaC6 H12 O6
Namebeta-D-glucopyranose;
beta-D-glucose;
D-glucose;
glucose
ChEMBLCHEMBL1614854
DrugBankDB02379
ZINCZINC000003833800
PDB chain6a0k Chain D Residue 1 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6a0k Structural features of a bacterial cyclic alpha-maltosyl-(1→6)-maltose (CMM) hydrolase critical for CMM recognition and hydrolysis.
Resolution1.94 Å
Binding residue
(original residue number in PDB)		E231 W232
Binding residue
(residue number reindexed from 1)		E230 W231
Annotation score4
Enzymatic activity
Catalytic site (original residue number in PDB) D116 R199 D201 E230 H296 D297
Catalytic site (residue number reindexed from 1) D115 R198 D200 E229 H295 D296
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0046872 metal ion binding
Biological Process
GO:0005975 carbohydrate metabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:6a0k, PDBe:6a0k, PDBj:6a0k
PDBsum6a0k
PubMed30181215
UniProtD2YYE1

[Back to BioLiP]