Structure of PDB 5ma0 Chain B Binding Site BS04
Receptor Information
>5ma0 Chain B (length=419) Species:
1150621
(Sulfurospirillum multivorans DSM 12446) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
AAEIRQQFAMTAGSPIIVNDKLERYAEVRTAFTHPTSFFKPNYKGEVKPW
FLSAYDEKVRQIENGENGPKMKAKNVGEARAGRALEAAGWTLDINYGNIY
PNRFFMLWSGETMTNTQLWAPVGLDRRPPDTTDPVELTNYVKFAARMAGA
DLVGVARLNRNWVYSEAVTIPADVPYEQSLHKEIEKPIVFKDVPLPIETD
DELIIPNTCENVIVAGIAMNREMMQTAPNSMACATTAFCYSRMCMFDMWL
CQFIRYMGYYAIPSCNGVGQSVAFAVEAGLGQASRMGACITPEFGPNVRL
TKVFTNMPLVPDKPIDFGVTEFCETCKKCARECPSKAITEGPRTFEGRSI
HNQSGKLQWQNDYNKCLGYWPESGGYCGVCVAVCPFTKNITEVWDGKINT
YGLDADHFRDTVSFRKDRV
Ligand information
Ligand ID
DUB
InChI
InChI=1S/C6H4Cl2O/c7-4-2-1-3-5(8)6(4)9/h1-3,9H
InChIKey
HOLHYSJJBXSLMV-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.6
c1cc(c(c(c1)Cl)O)Cl
CACTVS 3.385
Oc1c(Cl)cccc1Cl
Formula
C6 H4 Cl2 O
Name
2,6-dichlorophenol
ChEMBL
CHEMBL282597
DrugBank
ZINC
ZINC000000164836
PDB chain
5ma0 Chain B Residue 506 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5ma0
Cobamide-mediated enzymatic reductive dehalogenation via long-range electron transfer.
Resolution
1.9 Å
Binding residue
(original residue number in PDB)
F38 W96 Y102 Y246 W376 Y382
Binding residue
(residue number reindexed from 1)
F32 W90 Y96 Y240 W370 Y376
Annotation score
1
External links
PDB
RCSB:5ma0
,
PDBe:5ma0
,
PDBj:5ma0
PDBsum
5ma0
PubMed
28671181
[
Back to BioLiP
]