Structure of PDB 4d1q Chain B Binding Site BS04

Receptor Information
>4d1q Chain B (length=505) Species: 7370 (Musca domestica) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
HMQSRELKTVSADCKKEAIEKCAQWVVRDCRPFSAVSGSGFIDMIKFFIK
VGAEYGEHVNVEELLPSPITLSRKVTSDAKEKKALIGREIKSAVEKDGAS
ATIDLWTDNYIKRNFLGVTLHYHENNELRDLILGLKSLDFERSTAENIYK
KLKAIFSQFNVEDLSSIKFVTDRGANVVKSLANNIRINCSSHLLSNVLEN
SFEETPELNMPILACKNIVKYFKKANLQHRLRSSLKSECPTRWNSTYTML
RSILDNWESVIQILSEAGETQRIVHINKSIIQTMVNILDGFERIFKELQT
CSSPSLCFVVPSILKVKEICSPDVGDVADIAKLKVNIIKNVRIIWEENLS
IWHYTAFFFYPPALHMQQEKVAQIKEFCLSKMEDLELISHSKDISTTSFF
FPQLTQNNSREPPVCPSDEFEFYRKEIVILSEDFKVMEWWNLNSKKYPKL
SKLALSLLSIPASSAASERTFSLAGNIITEKRNRIGQQTVDSLLFLNSFY
KNFCK
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB4d1q Structural Basis of Hat Transposon End Recognition by Hermes, an Octameric DNA Transposase from Musca Domestica.
Resolution3.4 Å
Binding residue
(original residue number in PDB)		K91 R308 S309 S310 K312 T317 R318 W319 Q375 E572 R573 S576
Binding residue
(residue number reindexed from 1)		K15 R232 S233 S234 K236 T241 R242 W243 Q299 E468 R469 S472
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046983 protein dimerization activity

View graph for
Molecular Function
External links
PDB RCSB:4d1q, PDBe:4d1q, PDBj:4d1q
PDBsum4d1q
PubMed25036632
UniProtQ25442

[Back to BioLiP]