Structure of PDB 2gag Chain B Binding Site BS04
Receptor Information
>2gag Chain B (length=403) Species:
40324
(Stenotrophomonas maltophilia) [
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DLLPEHPEFLWANPEPKKSYDAIIVGGGGHGLATAYFLAKNHGITNVAVL
EKGWLAGGNMARNTTIIRSNYLWDESAGIYEKSLKLWEQLPEDLEYDFLF
SQRGVLNLAHTLGDVRESVRRVEANKLNGVDAEWLDPSQVKEACPIINTS
DDIRYPVMGATWQPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIK
DGEKVTGVKTTRGTIHAGKVALAGAGHSSVLAEMAGFELPIQSHPLQALV
SELFEPVHPTVVMSNHIHVYVSQAHKGELVMGAGIDSYNGYGQRGAFHVI
QEQMAAAVELFPIFARAHVLRTWGGIVDTTMDASPIISKTPIQNLYVNCG
WGTGGFKGTPGAGFTLAHTIANDEPHELNKPFSLERFETGHLIDEHGAAA
VAH
Ligand information
Ligand ID
FOA
InChI
InChI=1S/C5H4O3/c6-5(7)4-2-1-3-8-4/h1-3H,(H,6,7)
InChIKey
SMNDYUVBFMFKNZ-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
O=C(O)c1occc1
OpenEye OEToolkits 1.5.0
c1cc(oc1)C(=O)O
CACTVS 3.341
OC(=O)c1occc1
Formula
C5 H4 O3
Name
2-FUROIC ACID
ChEMBL
CHEMBL1232797
DrugBank
ZINC
ZINC000000158555
PDB chain
2gag Chain B Residue 503 [
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Receptor-Ligand Complex Structure
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PDB
2gag
Heterotetrameric sarcosine oxidase: structure of a diflavin metalloenzyme at 1.85 a resolution.
Resolution
1.85 Å
Binding residue
(original residue number in PDB)
T66 I68 R70 M265 Y272 K359 V403
Binding residue
(residue number reindexed from 1)
T64 I66 R68 M263 Y270 K357 V401
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
A63 T66 T67
Catalytic site (residue number reindexed from 1)
A61 T64 T65
Enzyme Commision number
1.5.3.24
: sarcosine oxidase (5,10-methylenetetrahydrofolate-forming).
Gene Ontology
Molecular Function
GO:0000166
nucleotide binding
GO:0008115
sarcosine oxidase activity
GO:0016491
oxidoreductase activity
Biological Process
GO:0046653
tetrahydrofolate metabolic process
Cellular Component
GO:0005737
cytoplasm
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:2gag
,
PDBe:2gag
,
PDBj:2gag
PDBsum
2gag
PubMed
16820168
UniProt
Q3ZDR0
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