Structure of PDB 1brr Chain B Binding Site BS04

Receptor Information
>1brr Chain B (length=231) Species: 2242 (Halobacterium salinarum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AQITGRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPA
IAFTMYLSMLLGYGLTMVPFGGEQNPIYWARYADWLFTTPLLLLDLALLV
DADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYV
LFFGFTSKAESMRPEVASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPL
NIETLLFMVLDVSAKVGFGLILLRSRAIFGE
Ligand information
Ligand IDARC
InChIInChI=1S/C20H42O/c1-17(2)9-6-10-18(3)11-7-12-19(4)13-8-14-20(5)15-16-21/h17-21H,6-16H2,1-5H3/t18-,19-,20-/m0/s1
InChIKeyAJAKLDUGVSKVDG-UFYCRDLUSA-N
SMILES
SoftwareSMILES
CACTVS 3.341CC(C)CCC[CH](C)CCC[CH](C)CCC[CH](C)CCO
ACDLabs 10.04OCCC(CCCC(CCCC(C)CCCC(C)C)C)C
OpenEye OEToolkits 1.5.0CC(C)CCCC(C)CCCC(C)CCCC(C)CCO
CACTVS 3.341
OpenEye OEToolkits 1.5.0		CC(C)CCC[C@H](C)CCC[C@H](C)CCC[C@H](C)CCO
FormulaC20 H42 O
Name3,7,11,15-TETRAMETHYL-HEXADECAN-1-OL
ChEMBL
DrugBankDB01637
ZINCZINC000005962605
PDB chain1brr Chain B Residue 1001 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1brr Lipid patches in membrane protein oligomers: crystal structure of the bacteriorhodopsin-lipid complex
Resolution2.9 Å
Binding residue
(original residue number in PDB)		M56 W80 F88
Binding residue
(residue number reindexed from 1)		M55 W79 F87
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005216 monoatomic ion channel activity
GO:0009881 photoreceptor activity
GO:0015454 light-driven active monoatomic ion transmembrane transporter activity
Biological Process
GO:0006811 monoatomic ion transport
GO:0007602 phototransduction
GO:1902600 proton transmembrane transport
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:1brr, PDBe:1brr, PDBj:1brr
PDBsum1brr
PubMed9751724
UniProtP02945|BACR_HALSA Bacteriorhodopsin (Gene Name=bop)

[Back to BioLiP]