Structure of PDB 8apn Chain Az Binding Site BS04

Receptor Information
>8apn Chain Az (length=59) Species: 353565 (Polytomella magna) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AVPKKKLSVFRRRNRRIWYWKKASPIIGQCSHCGFVGPSGVLGLSPIAKC
YPTEYKPPC
Ligand information
>8apn Chain A8 (length=350) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
cguucuucaaccaacggaauaaagcuacgcuagggauaacaggcuuauuc
gcucacagaguuuuaucgacgagcgcgguuggcaccucgauguuggauca
ccgcuuccuguagcugcaaacgguuauaaggguuagacuguucgucugau
aaugcgguacgugaucugaguucaaagcgucguaagacaguuugguuucu
aucuuuguuagcauaaguauuacggcguuguguacaguacgaaaggauug
uugcacaauuaaccaauaguuuaaagagcaacguuaauaaaccggaaaac
uuuuaacugcacugugcaguugcaggcaaagcaauguucagcuaaaaaaa
.........................................<<<<.<..<
<<<<...<<......>>...>>>>>....>>>>.>.......<<<<<.<<
<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>..
...>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>.......
..............<<<<.<<.<<<...<<<<<<................
.>>>>>>.<<<<<.....<<.......>>...>>>>>....>>>..>>>>
>>...................<<..<<<......>>>...>>........
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8apn Structure of a mitochondrial ribosome with fragmented rRNA in complex with membrane-targeting elements.
Resolution3.1 Å
Binding residue
(original residue number in PDB)		V77 P78 R90 K97 I101
Binding residue
(residue number reindexed from 1)		V2 P3 R15 K22 I26
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sun Nov 17 10:52:32 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '8apn', asym_id = 'Az', bs = 'BS04', title = 'Structure of a mitochondrial ribosome with fragm...rRNA in complex with membrane-targeting elements.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='8apn', asym_id='Az', bs='BS04', title='Structure of a mitochondrial ribosome with fragm...rRNA in complex with membrane-targeting elements.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0003735,0006412,0015934', uniprot = '', pdbid = '8apn', asym_id = 'Az'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003735,0006412,0015934', uniprot='', pdbid='8apn', asym_id='Az')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>