Structure of PDB 8apn Chain AM Binding Site BS04

Receptor Information
>8apn Chain AM (length=419) Species: 353565 (Polytomella magna) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TIFNTGVPGPRPEVAQKLSTEYQGHILRMISLAESASELDEVLWSSKKHL
RPVHIARSCLKLEYLRTKEKGREVSEPIKNLASELENYVELYSTKFTIGQ
VSQLVRGLSSIRRNIQPDLLLKLAAVVVADDGRQVQLANEMDCRDLFFGF
FSQGFDNELFWKRLSESVLPRLPYFNADVVSTVLRVVSGLRFLHNTEFAH
ATMTALVPKVGDLSPARLADAFFSASLLDPTDVSGLNAKLEERFLREFTS
FPIKDTVTMFQTVTVRRHSTPELAAQVAPLVAAQAHQLPVRHLRRALEGM
VTAGWKDTAEIPLYAILAKQAARLVLGKQSAATSAILGKHVDNQGYQRTP
VQLLRQLARIFANTGLKAGPGANQPLAPYFAALQRELEGRLAELDEQVTD
DFAESFKKVGIAEGARVQI
Ligand information
>8apn Chain A7 (length=534) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
aaucguaccgcaaaccaacacagguuaguuauuguaaaggcuguauaaaa
ccaggauaaaggaacucggcaaaauagguuauguuuucguacaaaaccac
aacaaaaguagugacuguuuaccaaaaacacaagacucugcuaacacuua
uaguggaaguauagugucugauaccugcccaaaggcaaagcaaacggcag
cuguaacucuaacggcucuaagguagcaaaauuccauggcauuuaaauga
ugucccgcaugaaugguauaacaacuucuuaacugucucuauucuggauu
aggcgaacuuuaaaugcuugugcagaugcaggcuagcuaacaagggacga
agagacccuaugcagcuuuagggcagguuauuauucaauaaacuaccuuu
uuucugggacggacgcucuuauuaaagaaacaagagugagcaaugguuuu
uacuaauuauaaaaaagaaaagcuuaacugcaauacaaacaauuaaagca
ggggcauugucggcaauaaugcauugaagaaaua
..............<<......>>...................<<.....
<<<<<<<<.<<.........<.....<<<<.<<<......>>>.>>>>..
.....<<<.<<<<..<<<.........>>>..<<<<.<<.....<<<...
..>>>.......>>.>>>>.<<<<<.<<<.....<<...>>....>>><<
<<<<.......>>>>>>........<...........<<<<<<.....>>
>>>>.....>....>>>>>..>>.>>.>>>...>..>>.>>>>>>>>..>
>..............<<<<<........>>>>>.................
...................<<<<..<<<<<<<....>>>>.>>>.>>>>.
..<<<.....>>>.<<<<<<...........>>>>>>..<<...<<<<<<
..<.....((......>.>>>>>>...<<<<..<<........>>..>>>
>.<<<...>>>.>>.)).................
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8apn Structure of a mitochondrial ribosome with fragmented rRNA in complex with membrane-targeting elements.
Resolution3.1 Å
Binding residue
(original residue number in PDB)		T0 I1
Binding residue
(residue number reindexed from 1)		T1 I2
External links