Structure of PDB 8g8p Chain AAA Binding Site BS04
Receptor Information
>8g8p Chain AAA (length=248) Species:
224325
(Archaeoglobus fulgidus DSM 4304) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
RVEVFPVEGLPLIKEGDDLAELISSRVRFEDGDVLVVCSTVISKAEGRIR
RLEEFNPSERAKEIAARIGKPAEFVQAVLEESEEVLLDFPFLLVKAKFGN
VCVNAGIDASNVEEGSLLLPPLDPDGSAEKLRRRILELTGKRVGVIITDT
NGRCFRRGVVGFAIGISGVKAMKDWIGRKDLYGRELEVTVECVADEIAAF
ANLLMGEGGDGIPAVVVRGLNVAGEGSMEEIYRSEEEDVIRRCLKRCL
Ligand information
Ligand ID
MN
InChI
InChI=1S/Mn/q+2
InChIKey
WAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mn+2]
CACTVS 3.341
[Mn++]
Formula
Mn
Name
MANGANESE (II) ION
ChEMBL
DrugBank
DB06757
ZINC
PDB chain
8g8p Chain AAA Residue 304 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8g8p
Poly-gamma-glutamylation of biomolecules.
Resolution
1.83 Å
Binding residue
(original residue number in PDB)
T151 E208
Binding residue
(residue number reindexed from 1)
T150 E207
Annotation score
1
Enzymatic activity
Enzyme Commision number
6.3.2.31
: coenzyme F420-0:L-glutamate ligase.
6.3.2.34
: coenzyme F420-1:gamma-L-glutamate ligase.
Gene Ontology
Molecular Function
GO:0005525
GTP binding
GO:0016874
ligase activity
GO:0043773
coenzyme F420-0 gamma-glutamyl ligase activity
GO:0046872
metal ion binding
GO:0052618
coenzyme F420-0:L-glutamate ligase activity
GO:0052619
coenzyme F420-1:gamma-L-glutamate ligase activity
Biological Process
GO:0052645
F420-0 metabolic process
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:8g8p
,
PDBe:8g8p
,
PDBj:8g8p
PDBsum
8g8p
PubMed
38346985
UniProt
O28028
|COFE_ARCFU Coenzyme F420:L-glutamate ligase (Gene Name=cofE)
[
Back to BioLiP
]