Structure of PDB 8t3x Chain A Binding Site BS04

Receptor Information
>8t3x Chain A (length=748) Species: 311400 (Thermococcus kodakarensis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MILDTDYITEDGKPVIRIFKKENGEFKIEYDRTFEPYFYALLKDDSAIEE
VKKITAERHGTVVTVKRVEKVQKKFLGRPVEVWKLYFTHPQDVPAIRDRI
RAHPAVVDIYEYDIPFAKRYLIDKGLIPMEGDEELTMLAFAIATLYHEGE
EFAEGPILMISYADEEGARVITWKNVDLPYVDVVSTEREMIKRFLRVVKE
KDPDVLITYNGDNFDFAYLKKRCEKLGINFALGRDGSEPKIQRMGDRFAV
EVKGRIHFDLYPVIRRTINLPTYTLEAVYEAVFGKPKEKVYAEEIAQAWE
TGEGLERVARYSMEDAKVTYELGKEFLPMEAQLSRLVGHPLWDVSRSSTG
NLVEWYLLRKAYERNELAPNKPDEREYERRLRESYAGGYVKEPEKGLWEN
IVYLDFRSLYPSIIITHNVSPDTLNREGCKEYDVAPQVGHRFCKDFPGFI
PSLLGDLLEERQKIKRKMKATVDLLEKKLLDYRQRRIKILASGYYGYYGY
ARARWYCKECAESVTAWGRQYIETTIREIEEKFGFKVLYADTDGFFAPIH
GADAETVKKKAKEFLDYINAKLPGLLELEYEGFYKRGFFVTKKKYAVIDE
EDKITTGGLEIVRRGWSEIAKETQARVLEALLKDGDVEKAVRIVKEVTEK
LSKYEVPPEKLVIHEQITRDLRDYKATGPHVAVAKRLAARGVKIRPGTVI
SYIVLKGSGRIGDRAISFDEFDPAKHKYDAEYYIENQVLPPVERILRA
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain8t3x Chain A Residue 802 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8t3x Directed Evolution of a Highly Efficient TNA Polymerase Achieved by Homologous Recombination
Resolution2.73 Å
Binding residue
(original residue number in PDB)
D405 F406 D543
Binding residue
(residue number reindexed from 1)
D405 F406 D543
Annotation score1
External links