Structure of PDB 8ryr Chain A Binding Site BS04

Receptor Information
>8ryr Chain A (length=334) Species: 376 (Bradyrhizobium sp.) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DLKLPRQKVELVAPPFVHAHEQATKQGPKIVEFKLTIEEKKVVIDEKGTT
FQAMTFNGSMPGPLMVVHEGDYVETTLVNPATNTMPHNIDFHSATGALGG
GALTLINPGEQVVLRWKATKTGVFVYHCAPGGPMIPWHVVSGMNGAVMVL
PRDGLNDGKGHALKYDKVYYVGEQDMYVPRDEKGNFKSYDSPGEAFTDTE
EMMKKLIPSHVVFNGKVGALTGKNALTANVGENVLIVHSQANRDSRPHLI
GGHGDYVWETGKFGNAPEVGLETWFIRGGSAGAAMYKFMQPGIYAYVTHN
LIEAADLGATAHFKVEGKWNDDLMTQVKAPAEIP
Ligand information
Ligand IDNO2
InChIInChI=1S/HNO2/c2-1-3/h(H,2,3)/p-1
InChIKeyIOVCWXUNBOPUCH-UHFFFAOYSA-M
SMILES
SoftwareSMILES
ACDLabs 10.04
CACTVS 3.341
[O-]N=O
OpenEye OEToolkits 1.5.0N(=O)[O-]
FormulaN O2
NameNITRITE ION
ChEMBL
DrugBankDB12529
ZINC
PDB chain8ryr Chain A Residue 403 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8ryr Spectroscopically validated pH-dependent MSOX movies provide detailed mechanism of copper nitrite reductases.
Resolution1.25 Å
Binding residue
(original residue number in PDB)
D92 H94 H129
Binding residue
(residue number reindexed from 1)
D90 H92 H127
Annotation score5
External links