Structure of PDB 8rfe Chain A Binding Site BS04 | ||
|
Receptor Information
|
| IndexError | Python 3.6.8: /usr/bin/python3 Wed Nov 27 08:46:41 2024 |
A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.
| /var/www/html/BioLiP/pdb.cgi in <module>() |
| 1435 title=pdb2title(pdbid) |
| 1436 if bs.startswith("BS"): |
| => 1437 pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title) |
| 1438 else: |
| 1439 if lig3: |
| pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '8rfe', asym_id = 'A', bs = 'BS04', title = 'Structure-function analysis of the cyclic beta-1,2-glucan synthase from Agrobacterium tumefaciens.' |
| /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='8rfe', asym_id='A', bs='BS04', title='Structure-function analysis of the cyclic beta-1,2-glucan synthase from Agrobacterium tumefaciens.') |
| 925 p=subprocess.Popen(cmd,shell=True,stdout=subprocess.PIPE) |
| 926 stdout,stderr=p.communicate() |
| => 927 line =stdout.decode().splitlines()[0] |
| 928 items =line.split('\t') |
| 929 rhea ='\n'.join(["RHEA:"+r for r in items[2].split(',')]) |
| line = '8rfe\tA\tBGC\t5', stdout = b'', stdout.decode = <built-in method decode of bytes object>, ).splitlines undefined |
IndexError: list index out of range
args =
('list index out of range',)
with_traceback =
<built-in method with_traceback of IndexError object>