Structure of PDB 7y9y Chain A Binding Site BS04

Receptor Information
>7y9y Chain A (length=1482) Species: 45657 (Desulfonema ishimotonii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MTTTMKISIEFLEPFRMTKWQESTRRNKNNKEFVRGQAFARWHRNKKDNT
KGRPYITGTLLRSAVIRSAENLLTLSDGKISEKTCCPGKFDTEDKDRLLQ
LRQRSTLRWTDKNPCPDNAETYCPFCELLGRSFRIHFGNLSLPGKPDFDG
PKAIGSQRVLNRVDFKSGKAHDFFKAYEVDHTRFPRFEGEITIDNKVSAE
ARKLLCDSLKFTDRLCGALCVIRFDNLAEKTAEQIISILDDNKKTEYTRL
LADAIRSLRRSSKLVAGLPKDHDGKDDHYLWDIGVTIRQILTTSADTKEL
KNAGKWREFCEKLGEALYLKSKDSRSVSIGSVLKETVVCGELVAKTPFFF
GAIDEDAKQTALQVLLTPDNKYRLPRSAVRGILRRDLQTYFDSPCNAELG
GRPCMCKTCRIMRGITVMDARSEYNAPPEIRHRTRINPFTGTVAEGALFN
MEVAPEGIVFPFQLRYRGSEDGLPDALKTVLKWWAEGQAFMSGAASTGKG
RFRMENAKYETLDLSDENQRNDYLKNWGWRDEKGLEELKKRLNSGLPEPG
NYRDPKWHEINVSIEMASPFINGDPIRAAVDKRGTAVVTFVKYKAEGEEA
KPVCAYKAESFRGVIRSAVARIHCECLLCQIFGSEYEAGKIRFEDLVFES
DPEPVTFDHVAIDRFTGGAADKKKFDDSPLPGSPARPLMLKGSFWIRRDV
LEDEEYCKALGKALADVNNGLYPLGGKSAIGYGQVKSLGIKGDDKRISRL
MNVAVPEKPKTDAEVRIEAEKVYYPHYFVEPHKKVEREEKPCGHQKFHEG
RLTGKIRCKLITKTPLIVPDTSNDDFFYHKSYAFFRLHKQIMIPGSELRG
MVSSVYETVTNSCFRIFDETKRLSWRMDAQDFLPGRVGKHIQKFSETARV
PFYDKTQKHFDILDEQEIAGEKPVRMWVKRFIKRLSLVDPAWKRRKEGIA
TFIEQKNGSYYFNVVTNNGCTSFHLWHKPDNFDQEKLEGIQNGEKLDCWV
RDSRYQKAFQEIPENDPDGWECKEGYLHVVGPSKVEFSDKKGDVINNFQG
TLPSVPNDWKTIRTNDFKNRKRKNEPVFCCEDDKGNYYTMAKYCETFFFD
LKENEEYEIPEKARIKYKELLRVYNNNPQAVPESVFQSRVARENVEKLKS
GDLVYFKHNEKYVEDIVPVRISRTVDDRMIGKRMSADLRPCHGDWVEDGD
LSALNAYPEKRLLLRHPKGLCPACRLFGTGSYKGRVRFGFASLENDPEWL
IPGKNPGDPFHGGPVMLSLLERPRPTWSIPGSDNKFKVPGRKFYVHHHAW
KTIKDGNHPTTGKAIEQSPNNRTVEALAGGNSFSFEIAFENLKEWELGLL
IHSLQLEKGLAHKLGMAKSMGFGSVEIDVESVRLRKDWKQWRNGNSEIPN
WLGKGFAKLKEWFRDELDFIENLKKLLWFPEGDQAPRVCYPMLRKKDDPN
GNSGYEELKDGEFKKEDRQKKLTTPWTPWASS
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain7y9y Chain A Residue 1702 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7y9y RNA-triggered protein cleavage and cell growth arrest by the type III-E CRISPR nuclease-protease.
Resolution2.77 Å
Binding residue
(original residue number in PDB)		C463 C472 C477
Binding residue
(residue number reindexed from 1)		C395 C404 C409
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0051607 defense response to virus

View graph for
Biological Process
External links
PDB RCSB:7y9y, PDBe:7y9y, PDBj:7y9y
PDBsum7y9y
PubMed36423304
UniProtA0A401FT36

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