Structure of PDB 7qd6 Chain A Binding Site BS04

Receptor Information
>7qd6 Chain A (length=908) Species: 1428 (Bacillus thuringiensis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GVKQLLSEAQRNELMDLSRLTEWDLVTFHTFSKHDLHLILKHRRGYNRLG
FALQLVLIRYPGWSLTEYKDIPQYVVAYVASQLQIPPEEFLVYAKRGNTL
WEHLGEIRTEYGYQNFSSEYKETLLQFLVQQAMDNNNTLYLIEITISTLR
KMKVILPAMYVIEDIVWEAKQQADQKVYSILHDGLVQEQKDQLDALLLPT
INGKSPLAWLKDVPAQPSPESFLKVIDRLQFVQKIGLTIDTTKINTNRLR
QLARLGSKYEPYAFRRFNEVKRYSMLVSFLLEITQDLIDYAIEIHDRLMM
NLQTKGKKEQDEIQQANGKKLNEKILQFITVCGTLIEAKETGKDAFAALD
EVMSWNEMVESVEEAKQLSRPLNYDYLDLLNTRYSYVRRYAPTLLRSLHF
RATKSGEPVLQALDTIHELNETGKRKVPHGAPLHFVSNRWQKHVYDDDGN
INRHYYELAALTELRNHIRSGDIFVSGSRHHKAFDDYLIPYDEWNEVSNI
PNGLTAPLKAEDYITDRINRLNEHLEWLSRLDRGTPEEAKAFSKLLHSML
PRIKLTDLLIEVASWTGFHDQFIHASTNQSPDQEEQNIVLATLMAMGTNI
GLTKMAEATPGISYRQMANASQWRMYDDAMVRAQSILVNFQKEQKLSSYW
GSDGMRLSGGTIYRFHVKVITARDALHVLDGLLHEEHYTGYTDQVFALTH
LLGFRFAPRIRDLADTKLFSQALLKGKINVKLIKENYEDIRRLAYSVQTG
KVSSALIMGKLGSYARQNKLATALGEMGRIEKTLFTLDYISNKAVRRRVQ
KGLNKGEAINALARIIFFGQRGEFRERALQDQLQRARALNIIINAISVWN
TVYMEKAVEELKARGEFREDLMPYAWPLGWEHINFLGEYKFEGLHDTGQM
NLRPLRIK
Ligand information
>7qd6 Chain E (length=54) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
agatgcatccatgggggtaccgccagcatttcggaaaaaaaccacgctaa
gatc
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7qd6 Structural insight into Tn3 family transposition mechanism.
Resolution3.0 Å
Binding residue
(original residue number in PDB)		D552 G554 T555 K560 S563 K564 H567 R871 K875 N878 Y948 A949 W950 G953 W954 E955
Binding residue
(residue number reindexed from 1)		D532 G534 T535 K540 S543 K544 H547 R797 K801 N804 Y874 A875 W876 G879 W880 E881
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0004803 transposase activity
Biological Process
GO:0006310 DNA recombination
GO:0006313 DNA transposition
GO:0032196 transposition

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:7qd6, PDBe:7qd6, PDBj:7qd6
PDBsum7qd6
PubMed36257990
UniProtP10021|TNPA_BACTU Transposase for transposon Tn4430 (Gene Name=tnpA)

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