Structure of PDB 7odf Chain A Binding Site BS04

Receptor Information
>7odf Chain A (length=703) Species: 77920 (Phage #D) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LTKIRREFPNKKFSSTDMKKAGKLLKAEGPDAVRDFLNSCQEIIGDFKPP
VKTNIVSISRPFEEWPVSMVGRAIQEYYFSLTKEELESVHPGTSSEDHKS
FFNITGLSNYNYTSVQGLNLIFKNAKAIYDGTLVKANNKNKKLEKKFNEI
NHKNGHLNNPPGINRNIYGYQGCAAKVFVPSKHKMVSLPKEYEGYNRDPN
LSLAGFRNRLEIPEGEPGHVPWFQRMDIPEGQIGHVNKIQRFNFVHGKNS
GKVKFSDKTGRVKRYHHSKYKDATKPYKFLEESKKVSALDSILAIITIGD
DWVVFDIRGLYRNVFYRELAQKGLTAVQLLDLFTGDPVIDPKKGVVTFSY
KEGVVPVFSQKIVPRFKSRDTLEKLTSQGPVALLSVDLGQNEPVAARVCS
LKNINDKITLDNSCRISFLDDYKKQIKDYRDSLDELEIKIRLEAINSLET
NQQVEIRDLDVFSADRAKANTVDMFDIDPNLISWDSMSDARVSTQISDLY
LKNGGDESRVYFEINNKRIKRSDYNISQLVRPKLSDSTRKNLNDSIWKLK
RTSEEYLKLSKRKLELSRAVVNYTIRQSKLLSGINDIVIILEDLDVKKKF
NGRGIRDIGWDNFFSSRKENRWFIPAFHKAFSELSSNRGLCVIEVNPAWT
SATCPDCGFCSKENRDGINFTCRKCGVSYHADIDVATLNIARVAVLGKPM
SGP
Ligand information
>7odf Chain F (length=43) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
auugauugcccaguacgcugggacagcugguaaugggauaccu
........<<<<<<..>>>>>>.....................
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7odf Structure of the mini-RNA-guided endonuclease CRISPR-Cas12j3.
Resolution2.66 Å
Binding residue
(original residue number in PDB)		F54 P57 K59 N61 K142 P187 G188 N190 G231 F232 R233 N234 R235 G244 H245 V246 P247 F249 Q250 F270 V271 K274 N275 S276 G277 K278 K280 F281 S282 K284 T285 G286 R287 V288 K289 R290 H292 H293 K295 Y296 Y303 K304 D316 R334 G335 Y337 R338 F341 Y342 R343 S534 R535 F538 R547 K559 R565 K584 K587 R588 E591 R594 A595 N598 G630 S642 R643 N663
Binding residue
(residue number reindexed from 1)		F47 P50 K52 N54 K135 P161 G162 N164 G205 F206 R207 N208 R209 G218 H219 V220 P221 F223 Q224 F244 V245 K248 N249 S250 G251 K252 K254 F255 S256 K258 T259 G260 R261 V262 K263 R264 H266 H267 K269 Y270 Y277 K278 D290 R308 G309 Y311 R312 F315 Y316 R317 S508 R509 F512 R521 K533 R539 K558 K561 R562 E565 R568 A569 N572 G604 S616 R617 N637
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