Structure of PDB 6vjv Chain A Binding Site BS04

Receptor Information
>6vjv Chain A (length=96) Species: 268746 (Prochlorococcus phage P-SSM2) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AYSITLRSPDGAEEVVQCEEDQYILEAAEDAGLDMPSSCRAGACSACLGK
VLEGSVNNEEQSFLDDDQLEEGWSLLCVAMPQSDCVILTEQEDNLD
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain6vjv Chain A Residue 108 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6vjv Prochlorococcusphage ferredoxin: structural characterization and electron transfer to cyanobacterial sulfite reductases.
Resolution1.59 Å
Binding residue
(original residue number in PDB)		E27 D31
Binding residue
(residue number reindexed from 1)		E26 D30
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0009055 electron transfer activity
GO:0046872 metal ion binding
GO:0051536 iron-sulfur cluster binding
GO:0051537 2 iron, 2 sulfur cluster binding
Biological Process
GO:0022900 electron transport chain

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:6vjv, PDBe:6vjv, PDBj:6vjv
PDBsum6vjv
PubMed32434930
UniProtQ58M74

[Back to BioLiP]