Structure of PDB 6jq9 Chain A Binding Site BS04

Receptor Information
>6jq9 Chain A (length=482) Species: 1537994 (Alteromonas sp. LOR) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SGVLLESQTKITDGALHFDGKKLNHNTFENPSKSQAYDYFFGRNISAHGD
AVKPYKHFVFMTWYKGGKEERNVMLSRFNTKTGVVKTIQFPHRHTGFRGD
PLVGESHNTIGLAVSPLNGTIHMVYDMHAYVDDDETGRFKGRFVDDFFRY
SFSVAGAADVPDDEFTLEQFVKDTSELSQGADDYKHLTMTGNLQDKENFS
ALTYPKFYTSDDGELLHYMRWGGNNNGAYYFNKYDAKNQKWTRFTPFNHK
DQKTHGNAYNWGLYGQMKYINGKLRVGFQQRSANNDDRFKYQNGVYYAYS
DHPDGLGNWKNVDGEDMTWPLVNSDEIKIFEPGDYIDHTAPNSVHIVTGF
DWTVTENDDVHFITHVRSTDTKRSDYKEVSIHAFKPANAVDFTITTDFTG
ADSIYTSGDSIFIIGLKNGYPFVEKAKGGSNDFEVVYQQASGVKFDHGTI
HIENGKAYYYLMEKGAGNALPLHLQVIDLGVT
Ligand information
Ligand IDSO4
InChIInChI=1S/H2O4S/c1-5(2,3)4/h(H2,1,2,3,4)/p-2
InChIKeyQAOWNCQODCNURD-UHFFFAOYSA-L
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0[O-]S(=O)(=O)[O-]
CACTVS 3.341[O-][S]([O-])(=O)=O
ACDLabs 10.04[O-]S([O-])(=O)=O
FormulaO4 S
NameSULFATE ION
ChEMBL
DrugBankDB14546
ZINC
PDB chain6jq9 Chain A Residue 604 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6jq9 Biochemical characterization and structural analysis of ulvan lyase from marine Alteromonas sp. reveals the basis for its salt tolerance.
Resolution1.81 Å
Binding residue
(original residue number in PDB)		R137 H167
Binding residue
(residue number reindexed from 1)		R98 H128
Annotation score3
Enzymatic activity
Enzyme Commision number 4.2.2.-
Gene Ontology
Molecular Function
GO:0016829 lyase activity
GO:0046872 metal ion binding
Cellular Component
GO:0005576 extracellular region
GO:0005886 plasma membrane

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:6jq9, PDBe:6jq9, PDBj:6jq9
PDBsum6jq9
PubMed31751708
UniProtA0A109PTH9|UL24S_ALTSL Ulvan lyase, short isoform (Gene Name=LOR_107)

[Back to BioLiP]