Structure of PDB 6i5v Chain A Binding Site BS04
Receptor Information
>6i5v Chain A (length=421) Species:
302911
(Bifidobacterium animalis subsp. lactis) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
NKTGITYPEIKLGETGKDIKTTITFMNNRTDMNLDTYPGKNWKSYIEDFN
KMYPNITVKVQTDSNYADSALTRLQANNDSWDIMMIPAVDKSEFSNYFVP
YGETSEMEKVIKLADEKAYDGQTYGIANNGVTAGIVYNKKVFEEAGIKEL
PKTPEEFQADLKLIKEKTKAVPLYTNFVEDWAMGAWDQYIAGNATGDPKF
MNQVLPTTKEPFKKDASAPDTHPYAVYKTLYDAVANGYTEEDYSTTDWES
SKGKMNNGEIATMVLGAWAVPQMKQAGDHPDDIGYMPFPITVDGKQYATI
AGDYSYGINKNISKEKQEASMIFVKWMTEDSGFAKNEGGIPIKADETYET
FSDVELITDAPAKEGQEDLLANVNSDSELGINNGNGKKIQDIVVDAANRT
RTIDQIMDEWNQKWAKAVEDN
Ligand information
Ligand ID
ZN
InChI
InChI=1S/Zn/q+2
InChIKey
PTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
Formula
Zn
Name
ZINC ION
ChEMBL
CHEMBL1236970
DrugBank
DB14532
ZINC
PDB chain
6i5v Chain A Residue 510 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6i5v
Two binding proteins of the ABC transporter that confers growth of Bifidobacterium animalis subsp. lactis ATCC27673 on beta-mannan possess distinct manno-oligosaccharide-binding profiles.
Resolution
2.01 Å
Binding residue
(original residue number in PDB)
D250 S252
Binding residue
(residue number reindexed from 1)
D215 S217
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0046872
metal ion binding
View graph for
Molecular Function
External links
PDB
RCSB:6i5v
,
PDBe:6i5v
,
PDBj:6i5v
PDBsum
6i5v
PubMed
30947380
UniProt
A0A4V8GZY7
[
Back to BioLiP
]