Structure of PDB 6i5v Chain A Binding Site BS04

Receptor Information
>6i5v Chain A (length=421) Species: 302911 (Bifidobacterium animalis subsp. lactis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NKTGITYPEIKLGETGKDIKTTITFMNNRTDMNLDTYPGKNWKSYIEDFN
KMYPNITVKVQTDSNYADSALTRLQANNDSWDIMMIPAVDKSEFSNYFVP
YGETSEMEKVIKLADEKAYDGQTYGIANNGVTAGIVYNKKVFEEAGIKEL
PKTPEEFQADLKLIKEKTKAVPLYTNFVEDWAMGAWDQYIAGNATGDPKF
MNQVLPTTKEPFKKDASAPDTHPYAVYKTLYDAVANGYTEEDYSTTDWES
SKGKMNNGEIATMVLGAWAVPQMKQAGDHPDDIGYMPFPITVDGKQYATI
AGDYSYGINKNISKEKQEASMIFVKWMTEDSGFAKNEGGIPIKADETYET
FSDVELITDAPAKEGQEDLLANVNSDSELGINNGNGKKIQDIVVDAANRT
RTIDQIMDEWNQKWAKAVEDN
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain6i5v Chain A Residue 510 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6i5v Two binding proteins of the ABC transporter that confers growth of Bifidobacterium animalis subsp. lactis ATCC27673 on beta-mannan possess distinct manno-oligosaccharide-binding profiles.
Resolution2.01 Å
Binding residue
(original residue number in PDB)
D250 S252
Binding residue
(residue number reindexed from 1)
D215 S217
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:6i5v, PDBe:6i5v, PDBj:6i5v
PDBsum6i5v
PubMed30947380
UniProtA0A4V8GZY7

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