Structure of PDB 6hlx Chain A Binding Site BS04

Receptor Information
>6hlx Chain A (length=491) Species: 358 (Agrobacterium tumefaciens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GTLYFGLSGEPSTLDTVVQPGTSGRTVKLAIHRGLVNYGIDGKISPELAE
SYEVSPDAKEFTFHLRQAKFHDGTTVTSADVKASLERILDPKGKASFRNE
LSSISKIETPDEKTVKLTLSTPSVAMIDYLALPESVIVPAAWLAKNADNP
NAAPVGAGPFKFAGWTRGREITVKKFDDYYKKGKPDLDEVHYVFYSDENT
RVNALKSGDVDIIDYVPAKDAADIAKGPETQLLRNTGPFMGLQFNTKFEP
FSKPEVRQAIAYAVDRSAIINTAFNGLGSPIFGIAIPKGYMGYSDAKANY
FSHHVEKAKALLAKAGYPNGFEVRLLATSQYSFQQNTAIAIQSELAKIGI
KVKLDLPDWASRMAKASTGDYDFTVMGSLGEITDADWLSNYYYGGDKLVR
TNNSPYFNDQQINDLLDKGRATVDKAERVKIYDAFVDRALELSPLVYFMW
REQNYAVKKGVTGFTNMPGFLTFQSGLSIENTKIEHHHHHH
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain6hlx Chain A Residue 617 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6hlx Structural basis for two efficient modes of agropinic acid opine import into the bacterial pathogenAgrobacterium tumefaciens.
Resolution1.65 Å
Binding residue
(original residue number in PDB)		E77 H88
Binding residue
(residue number reindexed from 1)		E53 H64
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
GO:1904680 peptide transmembrane transporter activity
Biological Process
GO:0015833 peptide transport
GO:0055085 transmembrane transport
Cellular Component
GO:0030288 outer membrane-bounded periplasmic space
GO:0042597 periplasmic space
GO:0043190 ATP-binding cassette (ABC) transporter complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6hlx, PDBe:6hlx, PDBj:6hlx
PDBsum6hlx
PubMed30552142
UniProtO50260

[Back to BioLiP]