Structure of PDB 6dnl Chain A Binding Site BS04

Receptor Information
>6dnl Chain A (length=115) Species: 487 (Neisseria meningitidis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MFADTAALKAAMDTALKEHPDKPVVLDFYADWCISCKEMAAYTLNQPEVH
QAVDMERFFQIDVTANKPEHQALLKEYGLFGPPGVFVVRSDGSRSEPLLG
FVKADKFIEWYEQNR
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain6dnl Chain A Residue 207 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6dnl Structural and biochemical insights into the disulfide reductase mechanism of DsbD, an essential enzyme for neisserial pathogens.
Resolution1.7 Å
Binding residue
(original residue number in PDB)		C33 C36
Binding residue
(residue number reindexed from 1)		C33 C36
Annotation score1
Enzymatic activity
Enzyme Commision number 1.8.1.8: protein-disulfide reductase.
External links
PDB RCSB:6dnl, PDBe:6dnl, PDBj:6dnl
PDBsum6dnl
PubMed30181210
UniProtQ9JYM0|DSBD_NEIMB Thiol:disulfide interchange protein DsbD (Gene Name=dsbD)

[Back to BioLiP]