Structure of PDB 6bda Chain A Binding Site BS04

Receptor Information

>6bda Chain A (length=295) Species: 170178 (Ophiostoma novo-ulmi subsp. americana) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

SINPWILTGFADAEGSFLLRIRNNNKSSVGYSTELGFQITLHNKDKSILE
NIQSTWKVGVIANSGDNAVSLKVTRFEDLKVIIDHFEKYPLITQKLGDYM
LFKQAFCVMENKEHLKINGIKELVRIKAKLNWGLTDELKFAFPEIISKER
SLINKNIPNFKWLAGFTSGEGCFFVNLIKSKSKLGVQVQLVFSITQHIKD
KNLMNSLITYLGCGYIKEKNKSEFSWLDFVVTKFSDINDKIIPVFQENTL
IGVKLEDFEDWCKVAKLIEEKKHLTESGLDEIKKIKLNMNKGRVF

Ligand information

>6bda Chain E (length=10) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

aagtggaaag

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	6bda Wild-type I-OnuI bound to A3G substrate (post-cleavage complex)
Resolution	1.88 Å
Binding residue (original residue number in PDB)	A21 S24 R28 R30 K103 N139 W140
Binding residue (residue number reindexed from 1)	A13 S16 R20 R22 K95 N131 W132

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0004519	endonuclease activity

View graph for
Molecular Function

External links

PDB	RCSB:6bda, PDBe:6bda, PDBj:6bda
PDBsum	6bda
PubMed
UniProt	Q4VWW5

[Back to BioLiP]