Structure of PDB 5fsb Chain A Binding Site BS04

Receptor Information
>5fsb Chain A (length=226) Species: 486041 (Laccaria bicolor S238N-H82) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PWKGISGSLSRISAGSVTNVWGVNAANNIYRYTGDDAKPWVQIPGALTDI
GAAADGTVWGVNAAGNIYRYVWDSNHWTQIKGALKRISAGSRTNVWGVNA
GGAIYRYTGDDANPWVQIPGVLSDIGAGADGTVWGVNAAGEIYRYTGDQG
DPNHWVKIPGALSAISAGIKTNVWGVNSANNIYTSTGDDKNPWLGIGGSL
VDIGAGTDGVVWGVNAGGGIYRWIRD
Ligand information
Ligand ID6YR
InChIInChI=1S/C8H16O4Se/c1-4-5(9)6(10)7(11-2)8(12-4)13-3/h4-10H,1-3H3/t4-,5+,6+,7-,8+/m0/s1
InChIKeyJGCHFCAEXBTPJU-FMGWEMOISA-N
SMILES
SoftwareSMILES
CACTVS 3.385CO[CH]1[CH](O)[CH](O)[CH](C)O[CH]1[Se]C
OpenEye OEToolkits 1.7.6CC1C(C(C(C(O1)[Se]C)OC)O)O
OpenEye OEToolkits 1.7.6C[C@H]1[C@H]([C@H]([C@@H]([C@H](O1)[Se]C)OC)O)O
CACTVS 3.385CO[C@H]1[C@H](O)[C@H](O)[C@H](C)O[C@@H]1[Se]C
FormulaC8 H16 O4 Se
Namemethyl 1-seleno-2-O-methyl-beta-L-fucopyranoside;
2-O-methyl-methyl-seleno-L-fucopyranoside;
methyl 1-seleno-2-O-methyl-beta-L-fucoside;
methyl 1-seleno-2-O-methyl-L-fucoside;
methyl 1-seleno-2-O-methyl-fucoside
ChEMBL
DrugBank
ZINC
PDB chain5fsb Chain A Residue 303 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5fsb Crystal Structures of Fungal Tectonin in Complex with O-Methylated Glycans Suggest Key Role in Innate Immune Defense.
Resolution1.65 Å
Binding residue
(original residue number in PDB)		V122 N138 Y144 W156
Binding residue
(residue number reindexed from 1)		V121 N137 Y143 W155
Annotation score1
Binding affinityPDBbind-CN: -logKd/Ki=2.22,Kd=6.0mM
Enzymatic activity
Enzyme Commision number ?
External links