Structure of PDB 5cu2 Chain A Binding Site BS04
Receptor Information
>5cu2 Chain A (length=328) Species:
9606
(Homo sapiens) [
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SGPVPSRARVYTDVNTHRPSEYWDYESHVVEWGNQDDYQLVRKLGRGKYS
EVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIV
KDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMG
IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE
LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT
EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL
DKLLRYDHQSRLTAREAMEHPYFYTVVK
Ligand information
Ligand ID
54G
InChI
InChI=1S/C8H8O3/c1-5-2-3-7(9)6(4-5)8(10)11/h2-4,9H,1H3,(H,10,11)
InChIKey
DLGBEGBHXSAQOC-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 12.01
c1cc(c(cc1C)C(O)=O)O
OpenEye OEToolkits 1.9.2
Cc1ccc(c(c1)C(=O)O)O
CACTVS 3.385
Cc1ccc(O)c(c1)C(O)=O
Formula
C8 H8 O3
Name
2-hydroxy-5-methylbenzoic acid
ChEMBL
CHEMBL1161012
DrugBank
ZINC
ZINC000000388280
PDB chain
5cu2 Chain A Residue 404 [
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Receptor-Ligand Complex Structure
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PDB
5cu2
A fragment-based approach leading to the discovery of a novel binding site and the selective CK2 inhibitor CAM4066.
Resolution
1.705 Å
Binding residue
(original residue number in PDB)
V53 V66 K68 F113 M163 I174 D175
Binding residue
(residue number reindexed from 1)
V52 V65 K67 F112 M162 I173 D174
Annotation score
1
Binding affinity
PDBbind-CN
: -logKd/Ki=4.24,Kd=58uM
BindingDB: Kd=58000nM
Enzymatic activity
Catalytic site (original residue number in PDB)
D156 K158 N161 D175 P184 S194
Catalytic site (residue number reindexed from 1)
D155 K157 N160 D174 P183 S193
Enzyme Commision number
2.7.11.1
: non-specific serine/threonine protein kinase.
Gene Ontology
Molecular Function
GO:0004672
protein kinase activity
GO:0004674
protein serine/threonine kinase activity
GO:0005524
ATP binding
Biological Process
GO:0006468
protein phosphorylation
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:5cu2
,
PDBe:5cu2
,
PDBj:5cu2
PDBsum
5cu2
PubMed
28495381
UniProt
P68400
|CSK21_HUMAN Casein kinase II subunit alpha (Gene Name=CSNK2A1)
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