Structure of PDB 4y1t Chain A Binding Site BS04

Receptor Information
>4y1t Chain A (length=126) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QRGLAHLVVSNFRAEHLAGDATTATDAYLKVFFGGQEFRTGVVWNNNNPR
WTDKMDFENVLLSTGGPLRVQVWDADAGADDDLLGSCDRSPHSGFHEVTC
ELNHGRVKFSYHAKCLPHLTGGTCLE
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain4y1t Chain A Residue 604 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB4y1t Structural Basis for Ca2+-mediated Interaction of the Perforin C2 Domain with Lipid Membranes.
Resolution2.666 Å
Binding residue
(original residue number in PDB)		G428 D429 D483 D485 D491
Binding residue
(residue number reindexed from 1)		G19 D20 D74 D76 D82
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:4y1t, PDBe:4y1t, PDBj:4y1t
PDBsum4y1t
PubMed26306037
UniProtP10820|PERF_MOUSE Perforin-1 (Gene Name=Prf1)

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