Structure of PDB 3n71 Chain A Binding Site BS04

Receptor Information
>3n71 Chain A (length=468) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MTIGSMENVEVFTSEGKGRGLKATKEFWAADVIFAERAYSAVVFDSLINF
VCHTCFKRQEKLHRCGQCKFAHYCDRTCQKDAWLNHKNECAAIKKYGKVP
NENIRLAARIMWRVEREGTGLTEGCLVSVDDLQNHVEHFGEEEQKELRVD
VDTFLQYWPPQSQQFSMQYISHIFGVINCNGFTLSDQRGLQAVGVGIFPN
LGLVNHDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRALGKISEGEELTV
SYIDFLHLSEERRRQLKKQYYFDCSCEHCQKGLKDDLFLAAKEDPKPSQE
VVKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYV
LRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAG
LTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRM
FRQNEFMYHKMREAALNN
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain3n71 Chain A Residue 497 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB3n71 Crystal Structure of Cardiac-specific Histone Methyltransferase SmyD1 Reveals Unusual Active Site Architecture.
Resolution2.3 Å
Binding residue
(original residue number in PDB)		C208 C274 C279
Binding residue
(residue number reindexed from 1)		C208 C274 C279
Annotation score1
Enzymatic activity
Enzyme Commision number 2.1.1.354: [histone H3]-lysine(4) N-trimethyltransferase.
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003714 transcription corepressor activity
GO:0005515 protein binding
GO:0008168 methyltransferase activity
GO:0042800 histone H3K4 methyltransferase activity
GO:0046872 metal ion binding
GO:0140999 histone H3K4 trimethyltransferase activity
Biological Process
GO:0006338 chromatin remodeling
GO:0007507 heart development
GO:0010831 positive regulation of myotube differentiation
GO:0032259 methylation
GO:0035914 skeletal muscle cell differentiation
GO:0045663 positive regulation of myoblast differentiation
GO:0045892 negative regulation of DNA-templated transcription
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3n71, PDBe:3n71, PDBj:3n71
PDBsum3n71
PubMed20943667
UniProtP97443|SMYD1_MOUSE Histone-lysine N-methyltransferase Smyd1 (Gene Name=Smyd1)

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