Structure of PDB 2vuz Chain A Binding Site BS04

Receptor Information
>2vuz Chain A (length=129) Species: 13016 (Codakia orbicularis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GCPDGWTQFLDLCYIYQSAKASWASAQSSCQALGGILAEPDTACENEVLI
HMCKENGDAGSFGPWLGGQKVGGAWQWSSSGAAFDYLRWGPNEPNNSGGN
EDCLHYNWLSWNDLRCHYQASYLCQRAAE
Ligand information
Ligand IDGOL
InChIInChI=1S/C3H8O3/c4-1-3(6)2-5/h3-6H,1-2H2
InChIKeyPEDCQBHIVMGVHV-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.0C(C(CO)O)O
ACDLabs 12.01
CACTVS 3.370		OCC(O)CO
FormulaC3 H8 O3
NameGLYCEROL;
GLYCERIN;
PROPANE-1,2,3-TRIOL
ChEMBLCHEMBL692
DrugBankDB09462
ZINCZINC000000895048
PDB chain2vuz Chain A Residue 209 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB2vuz High Affinity Interaction between a Bivalve C-Type Lectin and a Biantennary Complex-Type N-Glycan Revealed by Crystallography and Microcalorimetry.
Resolution1.7 Å
Binding residue
(original residue number in PDB)		E39 W77 S80
Binding residue
(residue number reindexed from 1)		E39 W77 S80
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:2vuz, PDBe:2vuz, PDBj:2vuz
PDBsum2vuz
PubMed18687680
UniProtQ3KVL7

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