Structure of PDB 2hlh Chain A Binding Site BS04

Receptor Information
>2hlh Chain A (length=286) Species: 133505 (Bradyrhizobium sp. WM9) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TKERFVISRRRTGFGDCLWSLASAWSYAQRTGRTLVIDWRGSCYVEQPFS
NAFPAFFEPVEDIAGVPVICDDRVNQLSFPGPFFPRWWNRPSIDCINRPD
EQIFRERDELTELFQAREDSEANTIVCDACLMWRCSEEAERLIFRNIKLR
SEIRARIDALYEEHFSGHSIIGVHVRHDSELALHQVCMAIRKAKALSYPK
PVKVFLCTDSAQVLDQVSGLFPDVFAVPKAEMGIEGGASALIDMYLLARC
ATVIRFPPTSAFTRYARLLVPRIIEFDGHLTMIDNP
Ligand information
Ligand IDPO4
InChIInChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4)/p-3
InChIKeyNBIIXXVUZAFLBC-UHFFFAOYSA-K
SMILES
SoftwareSMILES
CACTVS 3.341[O-][P]([O-])([O-])=O
ACDLabs 10.04[O-]P([O-])([O-])=O
OpenEye OEToolkits 1.5.0[O-]P(=O)([O-])[O-]
FormulaO4 P
NamePHOSPHATE ION
ChEMBL
DrugBankDB14523
ZINC
PDB chain2hlh Chain A Residue 334 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB2hlh High-resolution structure of NodZ fucosyltransferase involved in the biosynthesis of the nodulation factor.
Resolution1.95 Å
Binding residue
(original residue number in PDB)		H175 R177 D224
Binding residue
(residue number reindexed from 1)		H174 R176 D209
Annotation score3
Enzymatic activity
Enzyme Commision number 2.4.1.-
Gene Ontology
Molecular Function
GO:0016757 glycosyltransferase activity
GO:0016758 hexosyltransferase activity
Biological Process
GO:0009312 oligosaccharide biosynthetic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:2hlh, PDBe:2hlh, PDBj:2hlh
PDBsum2hlh
PubMed17762900
UniProtQ9AQ17

[Back to BioLiP]