Structure of PDB 2cdp Chain A Binding Site BS04

Receptor Information
>2cdp Chain A (length=138) Species: 203122 (Saccharophagus degradans 2-40) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
STASIAVEAENFNAVGGTFSDGQAQPVSVYTVNGNTAINYVNQGDYADYT
IAVAQAGNYTISYQAGSGVTGGSIEFLVNENGSWASKTVTAVPNQGWDNF
QPLNGGSVYLSAGTHQVRLHGAGSNNWQWNLDKFTLSN
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain2cdp Chain A Residue 1140 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB2cdp Family 6 Carbohydrate Binding Modules in Beta-Agarases Display Exquisite Selectivity for the Non- Reducing Termini of Agarose Chains.
Resolution1.59 Å
Binding residue
(original residue number in PDB)		D21 P26 Y40 N42 D45
Binding residue
(residue number reindexed from 1)		D21 P26 Y40 N42 D45
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0030246 carbohydrate binding

View graph for
Molecular Function
External links
PDB RCSB:2cdp, PDBe:2cdp, PDBj:2cdp
PDBsum2cdp
PubMed16601125
UniProtQ6DN99

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