Structure of PDB 1uqy Chain A Binding Site BS04

Receptor Information
>1uqy Chain A (length=347) Species: 39650 (Cellvibrio mixtus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GLKSAYKDNFLIGAALNATIASGADERLNTLIAKEFNSITPENCMKWGVL
RDAQGQWNWKDADAFVAFGTKHNLHMVGHTLVWHSQIHDEVFKNADGSYI
SKAALQKKMEEHITTLAGRYKGKLAAWDVVNEAVGDDLKMRDSHWYKIMG
DDFIYNAFTLANEVDPKAHLMYNDYNIERTGKREATVEMIERLQKRGMPI
HGLGIQGHLGIDTPPIAEIEKSIIAFAKLGLRVHFTSLDVDVLPSVWELP
VAEVSTRFEYKPERDPYTKGLPQEMQDKLAKRYEDLFKLFIKHSDKIDRA
TFWGVSDDASWLNGFPIPGRTNYPLLFDRKLQPKDAYFRLLDLKRLE
Ligand information
Ligand IDXYP
InChIInChI=1S/C5H10O5/c6-2-1-10-5(9)4(8)3(2)7/h2-9H,1H2/t2-,3+,4-,5-/m1/s1
InChIKeySRBFZHDQGSBBOR-KKQCNMDGSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C1C(C(C(C(O1)O)O)O)O
CACTVS 3.341O[C@@H]1CO[C@@H](O)[C@H](O)[C@H]1O
OpenEye OEToolkits 1.5.0C1[C@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O
CACTVS 3.341O[CH]1CO[CH](O)[CH](O)[CH]1O
ACDLabs 10.04OC1C(O)COC(O)C1O
FormulaC5 H10 O5
Namebeta-D-xylopyranose;
beta-D-xylose;
D-xylose;
xylose
ChEMBL
DrugBank
ZINCZINC000001529215
PDB chain1uqy Chain C Residue 2 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB1uqy The Mechanisms by which Family 10 Glycoside Hydrolases Bind Decorated Substrates
Resolution1.72 Å
Binding residue
(original residue number in PDB)		N201 W272 E273
Binding residue
(residue number reindexed from 1)		N176 W247 E248
Annotation score4
Enzymatic activity
Catalytic site (original residue number in PDB) E157 N198 H233 S262 D264
Catalytic site (residue number reindexed from 1) E132 N173 H208 S237 D239
Enzyme Commision number 3.2.1.8: endo-1,4-beta-xylanase.
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016798 hydrolase activity, acting on glycosyl bonds
GO:0031176 endo-1,4-beta-xylanase activity
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0045493 xylan catabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:1uqy, PDBe:1uqy, PDBj:1uqy
PDBsum1uqy
PubMed14668328
UniProtO68541

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