Structure of PDB 1oe6 Chain A Binding Site BS04

Receptor Information
>1oe6 Chain A (length=244) Species: 8355 (Xenopus laevis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SPADSFLKVELELNLKLSNLVFQDPVQYVYNPLVYAWAPHENYVQTYCKS
KKEVLFLGMNPGPFGMAQTGVPFGEVNHVRDWLQIEGPVSKPEVEHPKRR
IRGFECPQSEVSGARFWSLFKSLCGQPETFFKHCFVHNHCPLIFMNHSGK
NLTPTDLPKAQRDTLLEICDEALCQAVRVLGVKLVIGVGRFSEQRARKAL
MAEGIDVTVKGIMHPSPRNPQANKGWEGIVRGQLLELGVLSLLT
Ligand information
Ligand IDHMU
InChIInChI=1S/C5H6N2O3/c8-2-3-1-6-5(10)7-4(3)9/h1,8H,2H2,(H2,6,7,9,10)
InChIKeyJDBGXEHEIRGOBU-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C1=C(C(=O)NC(=O)N1)CO
ACDLabs 10.04O=C1C(=CNC(=O)N1)CO
CACTVS 3.341OCC1=CNC(=O)NC1=O
FormulaC5 H6 N2 O3
Name5-HYDROXYMETHYL URACIL;
5-(HYDROXYMETHYL)PYRIMIDINE-2,4(1H,3H)-DIONE
ChEMBLCHEMBL1233360
DrugBank
ZINCZINC000000114121
PDB chain1oe6 Chain A Residue 1283 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB1oe6 Structure and Specificity of the Vertebrate Anti-Mutator Uracil-DNA Glycosylase Smug1
Resolution2.65 Å
Binding residue
(original residue number in PDB)		E146 V147
Binding residue
(residue number reindexed from 1)		E110 V111
Annotation score1
Enzymatic activity
Enzyme Commision number 3.2.2.-
Gene Ontology
Molecular Function
GO:0017065 single-strand selective uracil DNA N-glycosylase activity
Biological Process
GO:0006284 base-excision repair

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Molecular Function
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Biological Process
External links
PDB RCSB:1oe6, PDBe:1oe6, PDBj:1oe6
PDBsum1oe6
PubMed12820976
UniProtQ9YGN6|SMUG1_XENLA Single-strand selective monofunctional uracil DNA glycosylase (Gene Name=smug1)

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