Structure of PDB 1h9w Chain A Binding Site BS04

Receptor Information

>1h9w Chain A (length=232) Species: 99571 (Dioclea guianensis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

ADTIVAVELDSYPNTDIGDPSYPHIGIDIKSIRSKSTARWNMQTGKVGTA
HISYNSVAKRLSAVVSYTGSSSTTVSYDVDLNNVLPEWVRVGLSATTGLY
KETNTILSWSFTSKLKTANSLHFSFNQFSQNPKDLILQGDATTDSDGNLE
LTKVSSSGDPQGSSVGRALFYAPVHIWEKSAVVASFDATFTFLIKSPDRD
PADGITFFIANTDTSIPSGSGGRLLGLFPDAN

Ligand information

Ligand ID

InChI

InChI=1S/Ca/q+2

InChIKey

BHPQYMZQTOCNFJ-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Ca++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Ca+2]

Formula

Name

CALCIUM ION

PDB chain

1h9w Chain B Residue 243 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	1h9w Crystal Structure of Native and Cd/Cd-Substituted Dioclea Guianensis Seed Lectin. A Novel Manganese-Binding Site and Structural Basis of Dimer-Tetramer Association
Resolution	2.0 Å
Binding residue (original residue number in PDB)	E87 E183
Binding residue (residue number reindexed from 1)	E87 E178
Annotation score	4

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0005537	D-mannose binding
GO:0030246	carbohydrate binding
GO:0046872	metal ion binding
GO:0090729	toxin activity

	Biological Process
GO:0008150	biological_process
GO:0035821	modulation of process of another organism

	Cellular Component
GO:0005575	cellular_component

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component

External links

PDB	RCSB:1h9w, PDBe:1h9w, PDBj:1h9w
PDBsum	1h9w
PubMed	11453695
UniProt	P81637\|LECA_DIOGU Lectin alpha chain

[Back to BioLiP]