Structure of PDB 1dot Chain A Binding Site BS04

Receptor Information
>1dot Chain A (length=686) Species: 8839 (Anas platyrhynchos) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
APPKTTVRWCTISSAEEKKCNSLKDHMQQERVTLSCVQKATYLDCIKAIS
NNEADAISLDGGQVFEAGLAPYKLKPIAAEVYERSGGSTTSYYAVAVVKK
GTDFMIKDLRGKTSCHTGLGRSAGWNIPIGTLIHREDIEWEGIESGISEQ
AVAKFFSASCVPGATIEQKLCRQCKGDAKTKCLRNGPYSGYSGAFQCLKD
GKGDVAFVKHTTVQENAPEEKDEYELLCLDGSRQPVDSYKTCNWARVAAH
AVVARDDSKIDDIWSFLGMQAYSLGVDTTSDFHLFGPPGKKDPVLKDLLF
KDSAIMLKRVPELMDSQLYLGFEYYSAIQSLRKDQLTVGPRENKIQWCAV
GKDEKSKCDRWSVVSNGEVECTILDDNKDCIVKITKGEADAISLDGGFVY
TAGVCGLVPVVGESYEDETQCSKDEEQPAYYFAVAVVKKSSAITWNNLQG
KKSCHTAVGRTAGWNIPMGLIHNKTGSCDFDDYFSEGCAPGSPPNSRLCK
LCQGSGENLLEKCVASSHEKYYGYTGALRCLVEQGDVAFIKHSTVGENVS
GSNKDDWAKGLTRDDFELLCTNGKRAKTMDYKTCHLAKVPTHAVVARPEK
ANKIRELLEGQEKLFGLHGTEKERFMMFQSQTKDLLFKALTKCLVKLRQG
ITYKEFLGDEYYASVASLNTCNPSDLLQVCTFLEDK
Ligand information
Ligand IDCO3
InChIInChI=1S/CH2O3/c2-1(3)4/h(H2,2,3,4)/p-2
InChIKeyBVKZGUZCCUSVTD-UHFFFAOYSA-L
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C(=O)([O-])[O-]
ACDLabs 10.04
CACTVS 3.341		[O-]C([O-])=O
FormulaC O3
NameCARBONATE ION
ChEMBL
DrugBankDB14531
ZINC
PDB chain1dot Chain A Residue 690 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB1dot Structure of diferric duck ovotransferrin at 2.35 A resolution.
Resolution2.35 Å
Binding residue
(original residue number in PDB)		D395 T456 R460 T461 A462 G463 Y524
Binding residue
(residue number reindexed from 1)		D395 T456 R460 T461 A462 G463 Y524
Annotation score3
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
Biological Process
GO:0006826 iron ion transport
GO:0019731 antibacterial humoral response
Cellular Component
GO:0005576 extracellular region
GO:0005615 extracellular space
GO:0005769 early endosome
GO:0005886 plasma membrane
GO:0055037 recycling endosome

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:1dot, PDBe:1dot, PDBj:1dot
PDBsum1dot
PubMed15299626
UniProtP56410|TRFE_ANAPL Ovotransferrin

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