Structure of PDB 7y5e Chain 82 Binding Site BS04
Receptor Information
>7y5e Chain 82 (length=180) Species:
35688
(Porphyridium purpureum) [
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AKRASLRMGVFEKAMSDFKSDFPQFAKKGWGVTVKSERWNGRHAMAGWLI
IWITAYMKGHGMLPSGILEPSVWGPLAQLGGYEPIPRERAVVLIANVHLL
LVSVAATIAPFSFQDKLLLDEGESDEAPAGLIPSFKLGLTKEAELWNGRL
AMLGLIVIVFASVSSGTSILDLTNQMFGNA
Ligand information
Ligand ID
CLA
InChI
InChI=1S/C55H73N4O5.Mg/c1-13-39-35(8)42-28-44-37(10)41(24-25-48(60)64-27-26-34(7)23-17-22-33(6)21-16-20-32(5)19-15-18-31(3)4)52(58-44)50-51(55(62)63-12)54(61)49-38(11)45(59-53(49)50)30-47-40(14-2)36(9)43(57-47)29-46(39)56-42;/h13,26,28-33,37,41,51H,1,14-25,27H2,2-12H3,(H-,56,57,58,59,61);/q-1;+2/p-1/b34-26+;/t32-,33-,37+,41+,51-;/m1./s1
InChIKey
ATNHDLDRLWWWCB-AENOIHSZSA-M
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.7
CCC1=C(C2=Cc3c(c(c4n3[Mg]56[N]2=C1C=C7N5C8=C(C(C(=O)C8=C7C)C(=O)OC)C9=[N]6C(=C4)C(C9CCC(=O)OCC=C(C)CCCC(C)CCCC(C)CCCC(C)C)C)C)C=C)C
CACTVS 3.385
CCC1=C(C)C2=Cc3n4[Mg][N]5C(=CC1=N2)C(=C6C(=O)[CH](C(=O)OC)C(=C56)C7=NC(=Cc4c(C)c3C=C)[CH](C)[CH]7CCC(=O)OCC=C(C)CCC[CH](C)CCC[CH](C)CCCC(C)C)C
ACDLabs 12.01
O=C(OC)C1C(=O)C2=C(C)C3=CC=4C(CC)=C(C)C5=Cc6c(C=C)c(C)c7C=C8C(C)C(CCC(=O)OC\C=C(/C)CCCC(C)CCCC(C)CCCC(C)C)C=9C1=C2N3[Mg](n76)(N5=4)N8=9
OpenEye OEToolkits 2.0.7
CCC1=C(C2=Cc3c(c(c4n3[Mg]56[N]2=C1C=C7N5C8=C([C@H](C(=O)C8=C7C)C(=O)OC)C9=[N]6C(=C4)[C@H]([C@@H]9CCC(=O)OC/C=C(\C)/CCC[C@H](C)CCC[C@H](C)CCCC(C)C)C)C)C=C)C
CACTVS 3.385
CCC1=C(C)C2=Cc3n4[Mg][N@@]5C(=CC1=N2)C(=C6C(=O)[C@H](C(=O)OC)C(=C56)C7=NC(=Cc4c(C)c3C=C)[C@@H](C)[C@@H]7CCC(=O)OC\C=C(/C)CCC[C@H](C)CCC[C@H](C)CCCC(C)C)C
Formula
C55 H72 Mg N4 O5
Name
CHLOROPHYLL A
ChEMBL
DrugBank
DB02133
ZINC
PDB chain
7y5e Chain 82 Residue 305 [
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Receptor-Ligand Complex Structure
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PDB
7y5e
In situ structure of the red algal phycobilisome-PSII-PSI-LHC megacomplex.
Resolution
3.3 Å
Binding residue
(original residue number in PDB)
H76 I83 A128 N129 V130 H131 L132 L133 S136 L150
Binding residue
(residue number reindexed from 1)
H43 I50 A95 N96 V97 H98 L99 L100 S103 L117
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:7y5e
,
PDBe:7y5e
,
PDBj:7y5e
PDBsum
7y5e
PubMed
36922595
UniProt
A0A5J4YP51
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