Structure of PDB 8ugi Chain 4A Binding Site BS04

Receptor Information

>8ugi Chain 4A (length=513) Species: 9823 (Sus scrofa) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

FVNRWLYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDD
QIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMS
FWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLH
LAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPV
LAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGF
GMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDT
RAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVG
GLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFS
GYTLNQAWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTAWN
TISSMGSFISLTAVMLMIFIIWEAFASKREVSAVELTSTNLEWLHGCPPP
YHTFEEPTYINLK

Ligand information

Ligand ID

InChI

InChI=1S/Mg/q+2

InChIKey

JLVVSXFLKOJNIY-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Mg+2]
CACTVS 3.341	[Mg++]

Formula

Name

MAGNESIUM ION

PDB chain

8ugi Chain 4A Residue 607 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	8ugi High-resolution in situ structures of mammalian respiratory supercomplexes.
Resolution	2.1 Å
Binding residue (original residue number in PDB)	H368 D369
Binding residue (residue number reindexed from 1)	H367 D368
Annotation score	1

Gene Ontology

	Molecular Function
GO:0004129	cytochrome-c oxidase activity
GO:0046872	metal ion binding

	Biological Process
GO:0006119	oxidative phosphorylation
GO:0006123	mitochondrial electron transport, cytochrome c to oxygen
GO:0015990	electron transport coupled proton transport

	Cellular Component
GO:0005739	mitochondrion
GO:0005743	mitochondrial inner membrane
GO:0045277	respiratory chain complex IV

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Cellular Component

External links

PDB	RCSB:8ugi, PDBe:8ugi, PDBj:8ugi
PDBsum	8ugi
PubMed	38811722
UniProt	O79876\|COX1_PIG Cytochrome c oxidase subunit 1 (Gene Name=MT-CO1)

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