Structure of PDB 2kmb Chain 3 Binding Site BS04

Receptor Information

>2kmb Chain 3 (length=149) Species: 10116 (Rattus norvegicus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

AIEVKLANMEAEINTLKSKLELTNKLHAFSMGKKSGKKFFVTNHERMPFS
KVKALCSELRGTVAIPRNAEENKAIQEVAKTSAFLGITDEVTEGQFMYVT
GGRLTYSNWKKDEPNDHGSGEDCVTIVDNGLWNDISCQKKKTAVCEFPA

Ligand information

Ligand ID

InChI

InChI=1S/Ca/q+2

InChIKey

BHPQYMZQTOCNFJ-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Ca++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Ca+2]

Formula

Name

CALCIUM ION

PDB chain

2kmb Chain 3 Residue 3 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	2kmb Structure of a selectin-like mutant of mannose-binding protein complexed with sialylated and sulfated Lewis(x) oligosaccharides.
Resolution	2.0 Å
Binding residue (original residue number in PDB)	E165 D194
Binding residue (residue number reindexed from 1)	E93 D122
Annotation score	4

Enzymatic activity

Enzyme Commision number

External links

PDB	RCSB:2kmb, PDBe:2kmb, PDBj:2kmb
PDBsum	2kmb
PubMed	9033386
UniProt	P19999\|MBL1_RAT Mannose-binding protein A (Gene Name=Mbl1)

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