Structure of PDB 4z8c Chain 1m Binding Site BS04
Receptor Information
>4z8c Chain 1m (length=118) Species:
300852
(Thermus thermophilus HB8) [
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ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEA
EVVRLREYVENTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQ
RTRTNARTRKGPRKTVAG
Ligand information
Ligand ID
MG
InChI
InChI=1S/Mg/q+2
InChIKey
JLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341
[Mg++]
Formula
Mg
Name
MAGNESIUM ION
ChEMBL
DrugBank
DB01378
ZINC
PDB chain
4z8c Chain 1a Residue 1874 [
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Receptor-Ligand Complex Structure
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PDB
4z8c
The mechanism of inhibition of protein synthesis by the proline-rich peptide oncocin.
Resolution
2.9 Å
Binding residue
(original residue number in PDB)
T20 I22 I25
Binding residue
(residue number reindexed from 1)
T19 I21 I24
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000049
tRNA binding
GO:0003676
nucleic acid binding
GO:0003723
RNA binding
GO:0003735
structural constituent of ribosome
GO:0019843
rRNA binding
Biological Process
GO:0006412
translation
Cellular Component
GO:0005829
cytosol
GO:0005840
ribosome
GO:0015935
small ribosomal subunit
GO:1990904
ribonucleoprotein complex
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:4z8c
,
PDBe:4z8c
,
PDBj:4z8c
PDBsum
4z8c
PubMed
25984972
UniProt
P80377
|RS13_THET8 Small ribosomal subunit protein uS13 (Gene Name=rpsM)
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