Structure of PDB 1rdm Chain 1 Binding Site BS04

Receptor Information
>1rdm Chain 1 (length=111) Species: 10117 (Rattus rattus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KYFMSSVRRMPLNRAKALCSELQGTVATPRNAEENRAIQNVAKDVAFLGI
TDQRTENVFEDLTGNRVRYTNWNEGEPNNVGSGENCVVLLTNGKWNDVPC
SDSFLVVCEFS
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain1rdm Chain 1 Residue 228 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB1rdm Structural analysis of monosaccharide recognition by rat liver mannose-binding protein.
Resolution1.9 Å
Binding residue
(original residue number in PDB)		E190 N192 E198 N210 D211
Binding residue
(residue number reindexed from 1)		E76 N78 E84 N96 D97
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:1rdm, PDBe:1rdm, PDBj:1rdm
PDBsum1rdm
PubMed8557671
UniProtP08661|MBL2_RAT Mannose-binding protein C (Gene Name=Mbl2)

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