Structure of PDB 7pkt Chain r Binding Site BS03

Receptor Information
>7pkt Chain r (length=158) Species: 3055 (Chlamydomonas reinhardtii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EQETRLRFVSSEWRSGRPQPPERRIPICFPNITLQMMKLTPEQMDQVKET
GWLREVAFKTTPDVTKLEIAAFLQSVYGMNVERVSTINYLGRRRLAISRN
GKRLWWREDDWKKAYVIFRPPAGQEHLLTRQQRPVIEQIREAARAPRLPP
RPYPWERR
Ligand information
>7pkt Chain 7 (length=578) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uaccguacugcaaaccgacucaggugggcuaguauauauacucaggccau
agaaucaaccauguuaaaggaacucggcaaaaugcacgcgugaccucgga
ggaagcguggcuaaaaagacucagcaaauagccgacagcgacuguuuacc
aaaaacacaggauagugcuaacagacguaaauuaagcugcaaaaagcggu
uuuauuuuuggauguauacuauccgacgccaaacggcggcaguaacucua
acuguccuaagguagcgaaauuccuugacuuguaauuggcguccugcaug
aauggcggaacgacugucgggcugucucuaacauggaaucugugaauuug
aaaucuucgugcagaugcgaaggcgcuggcaagggacgaagagacccuau
gcagcuucgcugggugcuaagaguuacucuuauccucaagcuuuucuggg
acggaugcuuccuaaauaguaacgggagugaucaaugguacugcuacuua
aauagaaagcagugcuugacuguaagaaccacaguucgagcagggacgca
agucggcauuaaugacccaggguaacau
..............<<......>>......<<<......>>>........
<<<.<...<<<<<<<<.<<...............<<<<<...........
....>>>>>.<<....>>.............<<<<<<<<<..<<<.....
....>>>..<<<<<<<.....<<......<<<.<<<<<<<.....>>>>>
>>.>>>..>>.......>>>>>>>..<<<........<<<.<........
..>>>>....................<<<...........>>>.......
....>>.>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>.........
....<<<<<........>>>>>............................
........<<<..<.<.<<<<<<<.>>>>>>>..>.>.>>>...<<<...
..>>>.<<<<<<...........>>>>>>...<...<<<<<<<<..<<..
(((>>...>>>>>>>>...<<<<..<<<<....>>>>..>>>>.<<<...
.>>>.>.)))..................
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7pkt How to build a ribosome from RNA fragments in Chlamydomonas mitochondria.
Resolution3.0 Å
Binding residue
(original residue number in PDB)		T94 K95 N117 K141 Y196
Binding residue
(residue number reindexed from 1)		T65 K66 N88 K112 Y153
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sun Nov 17 04:46:05 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '7pkt', asym_id = 'r', bs = 'BS03', title = 'How to build a ribosome from RNA fragments in Chlamydomonas mitochondria.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='7pkt', asym_id='r', bs='BS03', title='How to build a ribosome from RNA fragments in Chlamydomonas mitochondria.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0003735,0005840,0006412', uniprot = '', pdbid = '7pkt', asym_id = 'r'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003735,0005840,0006412', uniprot='', pdbid='7pkt', asym_id='r')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>