Structure of PDB 8azw Chain q Binding Site BS03

Receptor Information
>8azw Chain q (length=238) Species: 4097 (Nicotiana tabacum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GVLVPESVLKKQKRSEEWALVKKQELEAAKKKNTENRKLIYNRAKQYAKE
YEAQERELIQLKREARLKGGFYVDPEAKLLFIIRIRGINAMAPQTKKILQ
LLRLRQIFNGVFLKVNKATVNMLHRVEPYVTYGYPNLKSIRELIYKRGYG
KVEKQRIALTDNSVIEQVLGKHGIICIEDLVHEIITVGPHFKEANNFLWP
FQLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain8azw Chain q Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB8azw Structure of the actively translating plant 80S ribosome at 2.2 angstrom resolution.
Resolution2.14 Å
Binding residue
(original residue number in PDB)		Q110 Q206
Binding residue
(residue number reindexed from 1)		Q106 Q202
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8azw, PDBe:8azw, PDBj:8azw
PDBsum8azw
PubMed37156858
UniProtA0A1S4A5Z2

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