Structure of PDB 7pip Chain d Binding Site BS03

Receptor Information
>7pip Chain d (length=175) Species: 272634 (Mycoplasmoides pneumoniae M129) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NLKAHYQKTIAKELQKSFAFSSIMQVPRLEKIVINMGVGDAIRDSKFLES
ALNELHLISGQKPVATKAKNAISTYKLRAGQLIGCKVTLRGERMWAFLEK
LIYVALPRVRDFRGLSLKSFDGRGNYTIGIKEQIIFPEIVYDDIKRIRGF
DVTLVTSTNKDSEALALLRALNLPL
Ligand information
>7pip Chain 7 (length=76) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ggucuuguagcucagucgguagagcaacggucugaagaaccgugugucgg
caguucgauucugcccgagaccacca
<<<<<<<..<<<<........>>>><<<<<.........>>>>.>...<<
<<<.......>>>>>>>>>>>>....
Receptor-Ligand Complex Structure
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PDB7pip Visualizing translation dynamics at atomic detail inside a bacterial cell.
Resolution9.3 Å
Binding residue
(original residue number in PDB)		S75 K78 R80
Binding residue
(residue number reindexed from 1)		S73 K76 R78
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7pip, PDBe:7pip, PDBj:7pip
PDBsum7pip
PubMed36171285
UniProtQ50306|RL5_MYCPN Large ribosomal subunit protein uL5 (Gene Name=rplE)

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