Structure of PDB 7pha Chain d Binding Site BS03

Receptor Information
>7pha Chain d (length=175) Species: 272634 (Mycoplasmoides pneumoniae M129) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NLKAHYQKTIAKELQKSFAFSSIMQVPRLEKIVINMGVGDAIRDSKFLES
ALNELHLISGQKPVATKAKNAISTYKLRAGQLIGCKVTLRGERMWAFLEK
LIYVALPRVRDFRGLSLKSFDGRGNYTIGIKEQIIFPEIVYDDIKRIRGF
DVTLVTSTNKDSEALALLRALNLPL
Ligand information
>7pha Chain 7 (length=76) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ggucuuguagcucagucgguagagcaacggucugaagaaccgugugucgg
caguucgauucugcccgagaccacca
<<<<<<....<<<........>>>...<<<.........>>>......<<
<<.........>>>>.>>>>>>....
Receptor-Ligand Complex Structure
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PDB7pha Visualizing translation dynamics at atomic detail inside a bacterial cell.
Resolution8.5 Å
Binding residue
(original residue number in PDB)		A73 I74 S75 Y77 K78 L79 R80
Binding residue
(residue number reindexed from 1)		A71 I72 S73 Y75 K76 L77 R78
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7pha, PDBe:7pha, PDBj:7pha
PDBsum7pha
PubMed36171285
UniProtQ50306|RL5_MYCPN Large ribosomal subunit protein uL5 (Gene Name=rplE)

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