Structure of PDB 7bkc Chain a Binding Site BS03

Receptor Information
>7bkc Chain a (length=662) Species: 323259 (Methanospirillum hungatei JF-1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PRIGVFVCHCGTNIAGSMSIDDVVNYAKTLPYVAVADQYQYMCSTPGQKK
IDDAIKEYNLTGVVVAACSPRLHEPTFRTATKEGGLNPFRFEMANIREQN
SWVHMHGMWDEATQKAKDQVRMAVAKAAKLEDLVPKSVPVEKTAMVVGGG
VAGMQAALDLASAGIKTYLIERTPTIGGRMSQLDKTFPTLDCSQCILTPK
MVDVGRHPNIEMMTYTEVEKVEGYIGNFDVTLRKKARGVLTPTEATAKGI
VGGGCNGCGDCSAVCPVIKPNPFEMGMAPRKAIYIYHAQVMPLIYTVDFD
SCVKCGLCVEACGDKKAIDLEMQDEFITVKVGTAVLATGYELFPIENKRE
WGYKQFDNVINALEFERLICASGPTGGHLVRPSDGKTPMKVGFVLCAGSR
DNTGIGKPYCSRFCCMYSLKHAHQIMEKIPGAVAYLFYMDIRSFGKMYEE
FYYRIQHEGAKFIRGRVANVLEDKETKNLHVFTEDTLLGRPVDVEVDLLV
LAAAVQPNEGANELRKKFGVSASQDGWMLEAHPKLNPCGTTTAGVFLAGV
CQGPKDIPDTVAQAEGAASAASIPIHMGEVELEPYFAMCIDELCAGCGMC
VNLCPYSALSLGEKNGRTVMVVTEAKCKGCGTCGGFCPGGAIKMQHFTTP
QIVAQIDAFFAG
Ligand information
Ligand IDSF4
InChIInChI=1S/4Fe.4S
InChIKeyLJBDFODJNLIPKO-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7[S]12[Fe]3[S]4[Fe]1[S]5[Fe]2[S]3[Fe]45
CACTVS 3.385S1[Fe]S[Fe]1.S2[Fe]S[Fe]2
FormulaFe4 S4
NameIRON/SULFUR CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain7bkc Chain a Residue 703 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7bkc Three-megadalton complex of methanogenic electron-bifurcating and CO 2 -fixing enzymes.
Resolution3.0 Å
Binding residue
(original residue number in PDB)		C14 C16 Y47 C49 C74 R103
Binding residue
(residue number reindexed from 1)		C8 C10 Y41 C43 C68 R97
Annotation score4
Enzymatic activity
Enzyme Commision number 1.8.-.-
Gene Ontology
Molecular Function
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding
GO:0051539 4 iron, 4 sulfur cluster binding

View graph for
Molecular Function
External links
PDB RCSB:7bkc, PDBe:7bkc, PDBj:7bkc
PDBsum7bkc
PubMed34516836
UniProtQ2FKZ1

[Back to BioLiP]