Structure of PDB 6zno Chain Y Binding Site BS03

Receptor Information
>6zno Chain Y (length=410) Species: 9823 (Sus scrofa) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ASLLQSERVLYLVQGEKKVRAPLSQLYFCRYCSELRSLECVSHEVDSHYC
PSCLENMPSAEAKLKKNRCANCFDCPGCMHTLSTRATAYYLACGFCRWTS
RDVGMADKSVASGGWQEPDHPHTQRMNKLIEYYQQLAQKEKVERDRKKLA
RRRNYMPLAFSQHTKEIKIEPAQAVDEVEPLPEDYYTRPVNLTEVTTLQQ
RLLQPDFQPICASQLYPRHKHLLIKRSLRCRQCEHNLSKPEFNPTSIKFK
IQLVAVNYIPEVRIMSIPNLRYMKESQVLLTLTNPVENLTHVTLLECEEG
DPDDTNSTAKVSVPPTELVLAGKDAAAEYDELAEPQDFPDDPDVVAFRKA
NKVGVFIKVTPQREEGDVTVCFKLKHDFKNLAAPIRPVEEADPGAEVSWL
TQHVELSLGP
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain6zno Chain Y Residue 503 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6zno Cryo-EM reveals the complex architecture of dynactin's shoulder region and pointed end.
Resolution6.8 Å
Binding residue
(original residue number in PDB)
C76 C79 C111
Binding residue
(residue number reindexed from 1)
C75 C78 C93
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0001725 stress fiber
GO:0005737 cytoplasm
GO:0005813 centrosome
GO:0005856 cytoskeleton
GO:0005869 dynactin complex
GO:0005938 cell cortex
GO:0030017 sarcomere

View graph for
Cellular Component
External links
PDB RCSB:6zno, PDBe:6zno, PDBj:6zno
PDBsum6zno
PubMed33734450
UniProtA0A4X1TB62|DCTN4_PIG Dynactin subunit 4 (Gene Name=DCTN4)

[Back to BioLiP]